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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">vavilov</journal-id><journal-title-group><journal-title xml:lang="ru">Вавиловский журнал генетики и селекции</journal-title><trans-title-group xml:lang="en"><trans-title>Vavilov Journal of Genetics and Breeding</trans-title></trans-title-group></journal-title-group><issn pub-type="epub">2500-3259</issn><publisher><publisher-name>Institute of Cytology and Genetics of Siberian Branch of the RAS</publisher-name></publisher></journal-meta><article-meta><article-id custom-type="elpub" pub-id-type="custom">vavilov-147</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>Статьи</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>Articles</subject></subj-group></article-categories><title-group><article-title>ХАРАКТЕРИСТИКА ИЗМЕНЕНИЯ КОЛИЧЕСТВА УМЕРЕННЫХ ПОВТОРОВ В ГЕНОМЕ КЛЕТОК КОСТНОГО МОЗГА ЭКСПЕРИМЕНТАЛЬНЫХ МЫШЕЙ НА ФОНЕ ИНЪЕКЦИИ ЦИКЛОФОСФАНА И ЭКЗОГЕННОЙ ДНК ЧЕЛОВЕКА</article-title><trans-title-group xml:lang="en"><trans-title>CHARACTERISTIC CHANGES IN THE COPY NUMBER OF INTERSPERSED REPEATS IN BONE MARROW CELLS OF MICE TREATED WITH CYCLOPHOSPHAMIDE AND EXOGENOUS HUMAN DNA</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Долгова</surname><given-names>Е. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Dolgova</surname><given-names>E. V.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Прокопенко</surname><given-names>А. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Prokopenko</surname><given-names>A. V.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Николин</surname><given-names>В. П.</given-names></name><name name-style="western" xml:lang="en"><surname>Nikolin</surname><given-names>V. P.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Попова</surname><given-names>Н. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Popova</surname><given-names>N. A.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Проскурина</surname><given-names>А. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Proskurina</surname><given-names>A. S.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Орищенко</surname><given-names>К. Е.</given-names></name><name name-style="western" xml:lang="en"><surname>Orishchenko</surname><given-names>K. E.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Алямкина</surname><given-names>Е. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Alyamkina</surname><given-names>E. A.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Ефремов</surname><given-names>Я. Р.</given-names></name><name name-style="western" xml:lang="en"><surname>Efremov</surname><given-names>Ya. R.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Черных</surname><given-names>Е. Р.</given-names></name><name name-style="western" xml:lang="en"><surname>Chernykh</surname><given-names>E. R.</given-names></name></name-alternatives><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Останин</surname><given-names>А. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Ostanin</surname><given-names>A. A.</given-names></name></name-alternatives><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Богачев</surname><given-names>С. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Bogachev</surname><given-names>S. S.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Гвоздева</surname><given-names>Т. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Gvozdeva</surname><given-names>T. S.</given-names></name></name-alternatives><xref ref-type="aff" rid="aff-4"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Малкова</surname><given-names>Е. М.</given-names></name><name name-style="western" xml:lang="en"><surname>Malkova</surname><given-names>E. M.</given-names></name></name-alternatives><xref ref-type="aff" rid="aff-5"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Таранов</surname><given-names>О. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Taranov</surname><given-names>O. S.</given-names></name></name-alternatives><xref ref-type="aff" rid="aff-5"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Рогачев</surname><given-names>В. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Rogachev</surname><given-names>V. A.</given-names></name></name-alternatives><email xlink:type="simple">gorbi@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Панов</surname><given-names>А. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Panov</surname><given-names>A. V.</given-names></name></name-alternatives><xref ref-type="aff" rid="aff-6"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Загребельный</surname><given-names>С. Н.</given-names></name><name name-style="western" xml:lang="en"><surname>Zagrebelnyi</surname><given-names>S. N.</given-names></name></name-alternatives><xref ref-type="aff" rid="aff-7"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Шурдов</surname><given-names>М. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Shurdov</surname><given-names>M. A.</given-names></name></name-alternatives><xref ref-type="aff" rid="aff-8"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru">Федеральное государственное бюджетное научное учреждение «Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук», Новосибирск, Россия<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru">Федеральное государственное бюджетное учреждение науки Институт цитологии и генетики Сибирского отделения Российской академии наук, Новосибирск, Россия&#13;
Новосибирский национальный исследовательский государственный университет, Новосибирск, Россия<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia&#13;
Novosibirsk National Research State University, Novosibirsk, Russia<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru">Федеральное государственное научное учреждение НИИ фундаментальной и  клинической иммунологии  (НИИФКИ)<country>Россия</country></aff><aff xml:lang="en">Institute of Clinical Immunology SB RAMS, Novosibirsk, Russia<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-4"><aff xml:lang="ru">Новосибирский государственный медицинский университет,ГБОУ ВПО НГМУ Минздрава России<country>Россия</country></aff><aff xml:lang="en">Novosibirsk State Medical University, Novosibirsk, Russia<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-5"><aff xml:lang="ru">Федеральное бюджетное учреждение науки Государственный научный центр вирусологии и биотехнологии «Вектор», р.п. Кольцово, Новосибирская область, Россия<country>Россия</country></aff><aff xml:lang="en">Research Center for Virology and Biotechnology Vector, Koltsovo, Russia<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-6"><aff xml:lang="ru">WellsStar College of Health and Human Services, Kennesaw State University, Kennesaw, Georgia, USA<country>Соединённые Штаты Америки</country></aff><aff xml:lang="en">WellsStar College of Health and Human Services, Kennesaw State University Kennesaw, Georgia, USA<country>United States</country></aff></aff-alternatives><aff-alternatives id="aff-7"><aff xml:lang="ru">Федеральное государственное бюджетное образовательное учреждение высшего профессионального образования "Новосибирский национальный исследовательский государственный университет" (НГУ)<country>Россия</country></aff><aff xml:lang="en">Novosibirsk National Research State University, Novosibirsk, Russia<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-8"><aff xml:lang="ru">ООО «Панаген», Горно-Алтайск, Россия<country>Россия</country></aff><aff xml:lang="en">ООО Panagen, Gorno-Altaysk, Russia<country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2013</year></pub-date><pub-date pub-type="epub"><day>26</day><month>12</month><year>2014</year></pub-date><volume>17</volume><issue>2</issue><fpage>246</fpage><lpage>264</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Долгова Е.В., Прокопенко А.В., Николин В.П., Попова Н.А., Проскурина А.С., Орищенко К.Е., Алямкина Е.А., Ефремов Я.Р., Черных Е.Р., Останин А.А., Богачев С.С., Гвоздева Т.С., Малкова Е.М., Таранов О.С., Рогачев В.А., Панов А.В., Загребельный С.Н., Шурдов М.А., 2014</copyright-statement><copyright-year>2014</copyright-year><copyright-holder xml:lang="ru">Долгова Е.В., Прокопенко А.В., Николин В.П., Попова Н.А., Проскурина А.С., Орищенко К.Е., Алямкина Е.А., Ефремов Я.Р., Черных Е.Р., Останин А.А., Богачев С.С., Гвоздева Т.С., Малкова Е.М., Таранов О.С., Рогачев В.А., Панов А.В., Загребельный С.Н., Шурдов М.А.</copyright-holder><copyright-holder xml:lang="en">Dolgova E.V., Prokopenko A.V., Nikolin V.P., Popova N.A., Proskurina A.S., Orishchenko K.E., Alyamkina E.A., Efremov Y.R., Chernykh E.R., Ostanin A.A., Bogachev S.S., Gvozdeva T.S., Malkova E.M., Taranov O.S., Rogachev V.A., Panov A.V., Zagrebelnyi S.N., Shurdov M.A.</copyright-holder><license license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://vavilov.elpub.ru/jour/article/view/147">https://vavilov.elpub.ru/jour/article/view/147</self-uri><abstract><p>Инъекции экзогенной ДНК в определенный промежуток времени после введения цитостатика циклофосфана (ЦФ) приводят к заболеванию и гибели экспериментальных мышей (Долгова и др., 2011). В ходе проведенных исследований установлено, что экзогенная ДНК активно проникает во внутренние компартменты клеток костного мозга (ККМ), где подвергается процессингу (Долгова и др., 2012). При этом именно ККМ в первую очередь подвержены деструктивному воздействию синергичного влияния двух препаратов (Долгова и др., 2013).</p><p>В настоящем исследовании показано, что количество умеренных повторов генома мононуклеаров костного мозга мышей, подверженных воздействию цитостатика ЦФ, достоверно ниже, чем у необработанных животных. Указанный феномен фиксируется в промежуток времени 18–4 ч после инъекции ЦФ, когда остановлена репликация, в момент конечной фазы репарации двуцепочечных разрывов (ДЦР), существующих как промежуточный интермедиат репарации межцепочечных сшивок (МЦС). При инъекциях экзогенной ДНК в промежуток времени 18–0 ч после предобработки ЦФ количество умеренных повторов сохраняется на исходном уровне. Совокупность полученных фактов предполагает, что фрагменты экзогенной ДНК принимают участие в процессе репарации ДЦР таким образом, что нарушается корректный ход репаративного процесса.</p></abstract><trans-abstract xml:lang="en"><p>Mice were observed to get sick and die upon administration of exogenous DNA in a specific period of time following their pretreatment with the cytostatic cyclophosphamide (CP) (Dolgova et al., 2011). It was established that exogenous DNA reaches internal compartments of bone marrow cells (BMCs) where it is processed (Dolgova et al., 2012a). Thus, BMCs appear to be the primary targets for the synergic action of these preparations (Dolgova et al., 2012b).</p><p>In the present study, we show that the copy number for mouse interspersed genomic repeats decreases in the genome of mouse mononuclear cells as a result of interstrand cross-link (ICL) repair after pre-treatment with cytostatic CP. This phenomenon occurs within the time span from 18 to 24 h following CP injection, which corresponds to the final step in the repair of the majority of double-strand breaks (DSBs), as predominant intermediates in ICL repair. Injections of exogenous DNA in CP-pretreated mice preserve the copy number of interspersed repeats at the original level. Our results suggest that the fragments of exogenous DNA participate in ICL-induced DSB repair, thereby compromising the repair process.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>циклофосфан</kwd><kwd>экзогенная ДНК</kwd><kwd>межцепочечные сшивки</kwd><kwd>умеренные повторы генома</kwd><kwd>гомологичная рекомбинация</kwd></kwd-group><kwd-group xml:lang="en"><kwd>cyclophosphamide</kwd><kwd>exogenous DNA</kwd><kwd>interstrand cross-links</kwd><kwd>short interspersed repeat (SINE)</kwd><kwd>homologous recombination</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Бутовская П.Р., Павлова Г.В., Мартиросян И.А. и др. Соматический мозаицизм у мышей, выявляемый методом RAPD-PCR // Молекуляр. генет., микробиол. и вирусология. 2009. № 1. С. 3–7.</mixed-citation><mixed-citation xml:lang="en">Бутовская П.Р., Павлова Г.В., Мартиросян И.А. и др. Соматический мозаицизм у мышей, выявляемый методом RAPD-PCR // Молекуляр. генет., микробиол. и вирусология. 2009. № 1. С. 3–7.</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Долгова Е.В., Николин В.П., Попова Н.А. и др. Интернализация экзогенной ДНК во внутренние компартменты клеток костного мозга мышей // Вавилов. журн. генет. и селекции. 2012. Т. 16. № 2. С. 397–414.</mixed-citation><mixed-citation xml:lang="en">Долгова Е.В., Николин В.П., Попова Н.А. и др. Интернализация экзогенной ДНК во внутренние компартменты клеток костного мозга мышей // Вавилов. журн. генет. и селекции. 2012. Т. 16. № 2. С. 397–414.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Долгова Е.В., Николин В.П., Попова Н.А. и др. Патологические изменения, возникающие в организме мышей, обработанных сочетанием циклофосфана и экзогенной ДНК // Вавилов. журн. генет. и селекции. 2013. Т. 17. № 1. С. 129–146.</mixed-citation><mixed-citation xml:lang="en">Долгова Е.В., Николин В.П., Попова Н.А. и др. Патологические изменения, возникающие в организме мышей, обработанных сочетанием циклофосфана и экзогенной ДНК // Вавилов. журн. генет. и селекции. 2013. Т. 17. № 1. С. 129–146.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Долгова Е.В., Проскурина А.С., Николин В.П. и др. Характеристика временных параметров проявления эффекта токсического действия инъекций экзогенной ДНК на фоне предобработки цитостатиком циклофосфаном // Вавилов. журн. генет. и селекции. 2011. Т. 15. № 4. С. 674–689.</mixed-citation><mixed-citation xml:lang="en">Долгова Е.В., Проскурина А.С., Николин В.П. и др. Характеристика временных параметров проявления эффекта токсического действия инъекций экзогенной ДНК на фоне предобработки цитостатиком циклофосфаном // Вавилов. журн. генет. и селекции. 2011. Т. 15. № 4. С. 674–689.</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Кимиссаренко С.В., Лукинов Д.И., Черепенко Е.И. Биосинтез различных классов последовательностей ядерной ДНК при пролиферации клеток мышиной плазмоцитомы MOPC-21 // Биополимеры и клетка. 1986. Т. 2. № 4. С. 220–23.</mixed-citation><mixed-citation xml:lang="en">Кимиссаренко С.В., Лукинов Д.И., Черепенко Е.И. Биосинтез различных классов последовательностей ядерной ДНК при пролиферации клеток мышиной плазмоцитомы MOPC-21 // Биополимеры и клетка. 1986. Т. 2. № 4. С. 220–23.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Лихачева А.С., Рогачев В.А., Николин В.П. и др. Участие экзогенной ДНК в молекулярных процессах, протекающих в соматической клетке // Вестник ВОГиС. 2008. Т. 12. № 3. С. 426–473.</mixed-citation><mixed-citation xml:lang="en">Лихачева А.С., Рогачев В.А., Николин В.П. и др. Участие экзогенной ДНК в молекулярных процессах, протекающих в соматической клетке // Вестник ВОГиС. 2008. Т. 12. № 3. С. 426–473.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Маниатис Е., Фрич Э., Сэмбрук Дж. Методы генетической инженерии. Молекулярное клонирование: Пер. с англ. М.: Мир, 1984. 480 с.</mixed-citation><mixed-citation xml:lang="en">Маниатис Е., Фрич Э., Сэмбрук Дж. Методы генетической инженерии. Молекулярное клонирование: Пер. с англ. М.: Мир, 1984. 480 с.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Николин В.П., Попова Н.А., Себелева Т.Е. и др. Влияние экзогенной ДНК на восстановление лейкопоэза и противоопухолевый эффект циклофосфана // Вопр. онкологии. 2006. Т. 52. С. 336–340.</mixed-citation><mixed-citation xml:lang="en">Николин В.П., Попова Н.А., Себелева Т.Е. и др. Влияние экзогенной ДНК на восстановление лейкопоэза и противоопухолевый эффект циклофосфана // Вопр. онкологии. 2006. Т. 52. С. 336–340.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Смирнов Г.Б. Почему редуцируются бактериальные геномы? // Бреслеровские чтения. Спб.: Наука, 2007. С. 34–60.</mixed-citation><mixed-citation xml:lang="en">Смирнов Г.Б. Почему редуцируются бактериальные геномы? // Бреслеровские чтения. Спб.: Наука, 2007. С. 34–60.</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Abrams R.A., McCormack K., Bowles C., Deisseroth A.B. Cyclophosphamide treatment expands the circulating hematopoietic stem cell pool in dogs // J. Clin. Invest. 1981. V. 67. Nо. 5. P. 1392–1399.</mixed-citation><mixed-citation xml:lang="en">Abrams R.A., McCormack K., Bowles C., Deisseroth A.B. Cyclophosphamide treatment expands the circulating hematopoietic stem cell pool in dogs // J. Clin. Invest. 1981. V. 67. Nо. 5. P. 1392–1399.</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Akkari Y.M., Bateman R.L., Reifsteck C.A. et al. DNA replication is required to elicit cellular responses to psoraleninduced DNA interstrand cross-links // Mol. Cell Biol. 2000. V. 20. Nо. 21. P. 8283–8289.</mixed-citation><mixed-citation xml:lang="en">Akkari Y.M., Bateman R.L., Reifsteck C.A. et al. DNA replication is required to elicit cellular responses to psoraleninduced DNA interstrand cross-links // Mol. Cell Biol. 2000. V. 20. Nо. 21. P. 8283–8289.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">De Silva I.U., McHugh P.J., Clingen P.H. et al. Defi ning the roles of nucleotide excision repair and recombination in the repair of DNA interstrand cross-links in mammalian cells // Mol. Cell Biol. 2000. V. 20. P. 7980–7990.</mixed-citation><mixed-citation xml:lang="en">De Silva I.U., McHugh P.J., Clingen P.H. et al. Defi ning the roles of nucleotide excision repair and recombination in the repair of DNA interstrand cross-links in mammalian cells // Mol. Cell Biol. 2000. V. 20. P. 7980–7990.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Farzaneh F., Zalin R., Brill D., Shall S. DNA strand breaks and ADP-ribosyl transferase activation during cell differentiation // Nature. 1982. V. 300. Nо. 5890. P. 362–366.</mixed-citation><mixed-citation xml:lang="en">Farzaneh F., Zalin R., Brill D., Shall S. DNA strand breaks and ADP-ribosyl transferase activation during cell differentiation // Nature. 1982. V. 300. Nо. 5890. P. 362–366.</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Fleming R.A. An overview of cyclophosphamide and ifosfamide pharmacology // Pharmacotherapy. 1997. V. 17. P. 146–154.</mixed-citation><mixed-citation xml:lang="en">Fleming R.A. An overview of cyclophosphamide and ifosfamide pharmacology // Pharmacotherapy. 1997. V. 17. P. 146–154.</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Jack H.M., McDowell M., Steinberg C.M. et al. Looping out and deletion mechanism for the immunoglobulin heavychain class switch // Proc. Natl Acad. Sci. USA. 1988. V. 85. P. 1581–1585.</mixed-citation><mixed-citation xml:lang="en">Jack H.M., McDowell M., Steinberg C.M. et al. Looping out and deletion mechanism for the immunoglobulin heavychain class switch // Proc. Natl Acad. Sci. USA. 1988. V. 85. P. 1581–1585.</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Jahn C.L., Klobutcher L.A. Genome remodeling in ciliated protozoa // Annu. Rev. Microbiol. 2002. V. 56. P. 489–520.</mixed-citation><mixed-citation xml:lang="en">Jahn C.L., Klobutcher L.A. Genome remodeling in ciliated protozoa // Annu. Rev. Microbiol. 2002. V. 56. P. 489–520.</mixed-citation></citation-alternatives></ref><ref id="cit17"><label>17</label><citation-alternatives><mixed-citation xml:lang="ru">Jurka J., Kohany O., Pavlicek A. et al. Clustering, duplication and chromosomal distribution of mouse SINE retrotransposons // Cytogenet. Genome Res. 2005. V. 110. P. 117–123.</mixed-citation><mixed-citation xml:lang="en">Jurka J., Kohany O., Pavlicek A. et al. Clustering, duplication and chromosomal distribution of mouse SINE retrotransposons // Cytogenet. Genome Res. 2005. V. 110. P. 117–123.</mixed-citation></citation-alternatives></ref><ref id="cit18"><label>18</label><citation-alternatives><mixed-citation xml:lang="ru">Hamlin J.L. Mammalian origins of replication // Bioаssays. 1992. V. 14. Nо. 10. P. 651–659.</mixed-citation><mixed-citation xml:lang="en">Hamlin J.L. Mammalian origins of replication // Bioаssays. 1992. V. 14. Nо. 10. P. 651–659.</mixed-citation></citation-alternatives></ref><ref id="cit19"><label>19</label><citation-alternatives><mixed-citation xml:lang="ru">Hancock J.M. Gene factories, microfunctionalization and the evolution of gene families // Trends Genet. 2005. V. 21. P. 591–595.</mixed-citation><mixed-citation xml:lang="en">Hancock J.M. Gene factories, microfunctionalization and the evolution of gene families // Trends Genet. 2005. V. 21. P. 591–595.</mixed-citation></citation-alternatives></ref><ref id="cit20"><label>20</label><citation-alternatives><mixed-citation xml:lang="ru">Herriсk J. Genetic variation and DNA replication timing, or why is there late replicating DNA? // Evolution. 2011. V. 65. Nо. 11. P. 3031–3047.</mixed-citation><mixed-citation xml:lang="en">Herriсk J. Genetic variation and DNA replication timing, or why is there late replicating DNA? // Evolution. 2011. V. 65. Nо. 11. P. 3031–3047.</mixed-citation></citation-alternatives></ref><ref id="cit21"><label>21</label><citation-alternatives><mixed-citation xml:lang="ru">Holmquist G.P., Caston L.A. Replication time of interspersed repetitive DNA sequences in hamsters // Biochim. Biophys Acta. 1986. V. 868. No. 2/3. P. 164–177.</mixed-citation><mixed-citation xml:lang="en">Holmquist G.P., Caston L.A. Replication time of interspersed repetitive DNA sequences in hamsters // Biochim. Biophys Acta. 1986. V. 868. No. 2/3. P. 164–177.</mixed-citation></citation-alternatives></ref><ref id="cit22"><label>22</label><citation-alternatives><mixed-citation xml:lang="ru">Johnstone A.P., Williams G.T. Role of DNA breaks and ADPribosyl transferase activity in eukaryotic differentiation demonstrated in human lymphocytes // Nature. 1982. V. 300. No. 5890. P. 368–370.</mixed-citation><mixed-citation xml:lang="en">Johnstone A.P., Williams G.T. Role of DNA breaks and ADPribosyl transferase activity in eukaryotic differentiation demonstrated in human lymphocytes // Nature. 1982. V. 300. No. 5890. P. 368–370.</mixed-citation></citation-alternatives></ref><ref id="cit23"><label>23</label><citation-alternatives><mixed-citation xml:lang="ru">Kobayashi T. A new role of the rDNA and nucleolus in the nucleus--rDNA instability maintains genome integrity // Bioаssays. 2008. V. 30. No. 3. P. 267–272.</mixed-citation><mixed-citation xml:lang="en">Kobayashi T. A new role of the rDNA and nucleolus in the nucleus--rDNA instability maintains genome integrity // Bioаssays. 2008. V. 30. No. 3. P. 267–272.</mixed-citation></citation-alternatives></ref><ref id="cit24"><label>24</label><citation-alternatives><mixed-citation xml:lang="ru">Kotnis A., Kannan S., Sarin R. et al. Case-control study and meta-analysis of SULT1A1 Arg213His polymorphism for gene, ethnicity and environment interaction for cancer risk // Br. J. Cancer. 2008. V. 99. P. 1340–1347.</mixed-citation><mixed-citation xml:lang="en">Kotnis A., Kannan S., Sarin R. et al. Case-control study and meta-analysis of SULT1A1 Arg213His polymorphism for gene, ethnicity and environment interaction for cancer risk // Br. J. Cancer. 2008. V. 99. P. 1340–1347.</mixed-citation></citation-alternatives></ref><ref id="cit25"><label>25</label><citation-alternatives><mixed-citation xml:lang="ru">Kramerov D.A., Vassetzky N.S. Short retroposons in eukaryotic genomes // Int. Rev. Cytol. 2005. V. 247. Р. 165–221.</mixed-citation><mixed-citation xml:lang="en">Kramerov D.A., Vassetzky N.S. Short retroposons in eukaryotic genomes // Int. Rev. Cytol. 2005. V. 247. Р. 165–221.</mixed-citation></citation-alternatives></ref><ref id="cit26"><label>26</label><citation-alternatives><mixed-citation xml:lang="ru">Krayev A.S., Kramerov D.A., Skryabin K.G. et al. The nucleotide sequence of the ubiquitous repetitive DNA sequence B1 complementary to the most abundant class of mouse fold-back RNA // Nucl. Acids Res. 1980. V. 8. Nо. 6. P. 1201–1215.</mixed-citation><mixed-citation xml:lang="en">Krayev A.S., Kramerov D.A., Skryabin K.G. et al. The nucleotide sequence of the ubiquitous repetitive DNA sequence B1 complementary to the most abundant class of mouse fold-back RNA // Nucl. Acids Res. 1980. V. 8. Nо. 6. P. 1201–1215.</mixed-citation></citation-alternatives></ref><ref id="cit27"><label>27</label><citation-alternatives><mixed-citation xml:lang="ru">Lansdorp P.M. Major cutbacks at chromosome ends // Trends Biochem. Sci. 2005. V. 30. P. 388–395.</mixed-citation><mixed-citation xml:lang="en">Lansdorp P.M. Major cutbacks at chromosome ends // Trends Biochem. Sci. 2005. V. 30. P. 388–395.</mixed-citation></citation-alternatives></ref><ref id="cit28"><label>28</label><citation-alternatives><mixed-citation xml:lang="ru">Le Breton C., Hennion M., Arimondo P.B. et al. Replicationfork stalling and processing at a single psoralen interstrand crosslink in Xenopus egg extracts // PloS one. 2011. V. 6. Nо. 4. P. e18554.</mixed-citation><mixed-citation xml:lang="en">Le Breton C., Hennion M., Arimondo P.B. et al. Replicationfork stalling and processing at a single psoralen interstrand crosslink in Xenopus egg extracts // PloS one. 2011. V. 6. Nо. 4. P. e18554.</mixed-citation></citation-alternatives></ref><ref id="cit29"><label>29</label><citation-alternatives><mixed-citation xml:lang="ru">Likhacheva A.S., Nikolin V.P., Popova N.A. et al. Integration of human DNA fragments into the cell genomes of certain tissues from adult mice treated with cytostatic cyclophosphamide in combination with human DNA // Gene Ther. Mol. Biol. 2007. V. 11. P. 185–202.</mixed-citation><mixed-citation xml:lang="en">Likhacheva A.S., Nikolin V.P., Popova N.A. et al. Integration of human DNA fragments into the cell genomes of certain tissues from adult mice treated with cytostatic cyclophosphamide in combination with human DNA // Gene Ther. Mol. Biol. 2007. V. 11. P. 185–202.</mixed-citation></citation-alternatives></ref><ref id="cit30"><label>30</label><citation-alternatives><mixed-citation xml:lang="ru">Mazur L., Czyzewska A. Immunocytochemical analysis of apoptotic bone marrow cells after treatment of mice with WR-2721 and chemotherapeutic drugs // Folia Histochem. Cytobiol. 2001. V. 39. Nо. 2. P. 63–66.</mixed-citation><mixed-citation xml:lang="en">Mazur L., Czyzewska A. Immunocytochemical analysis of apoptotic bone marrow cells after treatment of mice with WR-2721 and chemotherapeutic drugs // Folia Histochem. Cytobiol. 2001. V. 39. Nо. 2. P. 63–66.</mixed-citation></citation-alternatives></ref><ref id="cit31"><label>31</label><citation-alternatives><mixed-citation xml:lang="ru">Moore R.C., Purugganan M.D. The evolutionary dynamics of plant duplicate genes // Curr. Opin. Plant Biol. 2005. V. 8. P. 122–128.</mixed-citation><mixed-citation xml:lang="en">Moore R.C., Purugganan M.D. The evolutionary dynamics of plant duplicate genes // Curr. Opin. Plant Biol. 2005. V. 8. P. 122–128.</mixed-citation></citation-alternatives></ref><ref id="cit32"><label>32</label><citation-alternatives><mixed-citation xml:lang="ru">Niedernhofer L.J., Odijk H., Budzowska M. et al. The structure-specific endonuclease Ercc1-Xpf is required to resolve DNA interstrand cross-link-induced double-strand breaks // Mol. Cell Biol. 2004. V. 24. Nо. 13. P. 5776–5787.</mixed-citation><mixed-citation xml:lang="en">Niedernhofer L.J., Odijk H., Budzowska M. et al. The structure-specific endonuclease Ercc1-Xpf is required to resolve DNA interstrand cross-link-induced double-strand breaks // Mol. Cell Biol. 2004. V. 24. Nо. 13. P. 5776–5787.</mixed-citation></citation-alternatives></ref><ref id="cit33"><label>33</label><citation-alternatives><mixed-citation xml:lang="ru">Paques F., Haber J.E. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae // Microbiol. Mol. Biol. Rev. 1999. V. 63. Nо. 2. P. 349–404.</mixed-citation><mixed-citation xml:lang="en">Paques F., Haber J.E. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae // Microbiol. Mol. Biol. Rev. 1999. V. 63. Nо. 2. P. 349–404.</mixed-citation></citation-alternatives></ref><ref id="cit34"><label>34</label><citation-alternatives><mixed-citation xml:lang="ru">Pвques F., Leung W.Y., Haber J.E. Expansions and contractions in a tandem repeat induced by double-strand break repair // Mol. Cell. Biol. 1998. V. 18. Nо. 4. P. 2045–2054.</mixed-citation><mixed-citation xml:lang="en">Pвques F., Leung W.Y., Haber J.E. Expansions and contractions in a tandem repeat induced by double-strand break repair // Mol. Cell. Biol. 1998. V. 18. Nо. 4. P. 2045–2054.</mixed-citation></citation-alternatives></ref><ref id="cit35"><label>35</label><citation-alternatives><mixed-citation xml:lang="ru">Roberts D.B. Drosophila: a practical approach. Oxford-Washington, DC: IRL Press, 1986. 295 p.</mixed-citation><mixed-citation xml:lang="en">Roberts D.B. Drosophila: a practical approach. Oxford-Washington, DC: IRL Press, 1986. 295 p.</mixed-citation></citation-alternatives></ref><ref id="cit36"><label>36</label><citation-alternatives><mixed-citation xml:lang="ru">Salem M.L., El-Naggar S.A., Cole D.J. Cyclophosphamide induces bone marrow to yield higher numbers of precursor dendritic cells in vitro capable of functional antigen presentation to T cells in vivo // Cell Immunol. 2010. V. 261. Nо. 2. P. 134–143.</mixed-citation><mixed-citation xml:lang="en">Salem M.L., El-Naggar S.A., Cole D.J. Cyclophosphamide induces bone marrow to yield higher numbers of precursor dendritic cells in vitro capable of functional antigen presentation to T cells in vivo // Cell Immunol. 2010. V. 261. Nо. 2. P. 134–143.</mixed-citation></citation-alternatives></ref><ref id="cit37"><label>37</label><citation-alternatives><mixed-citation xml:lang="ru">Serdobova I.M., Kramerov D.A. Short retroposons of the B2 superfamily: evolution and application for the study of rodent phylogeny // J. Mol. Evol. 1998. V. 46. P. 202–214.</mixed-citation><mixed-citation xml:lang="en">Serdobova I.M., Kramerov D.A. Short retroposons of the B2 superfamily: evolution and application for the study of rodent phylogeny // J. Mol. Evol. 1998. V. 46. P. 202–214.</mixed-citation></citation-alternatives></ref><ref id="cit38"><label>38</label><citation-alternatives><mixed-citation xml:lang="ru">Shibata A., Barton O., Noon A.T. et al. Role of ATM and the damage response mediator proteins 53BP1 and MDC1 in the maintenance of G(2)/M checkpoint arrest // Mol. Cell. Biol. 2010. V. 30. Nо. 13. P. 3371–3383.</mixed-citation><mixed-citation xml:lang="en">Shibata A., Barton O., Noon A.T. et al. Role of ATM and the damage response mediator proteins 53BP1 and MDC1 in the maintenance of G(2)/M checkpoint arrest // Mol. Cell. Biol. 2010. V. 30. Nо. 13. P. 3371–3383.</mixed-citation></citation-alternatives></ref><ref id="cit39"><label>39</label><citation-alternatives><mixed-citation xml:lang="ru">Tanaka H., Cao Y., Bergstrom D.A. et al. Intrastrand annealing leads to the formation of a large DNA palindrome and determines the boundaries of genomic amplifi cation in human cancer // Mol. Cell. Biol. 2007 . V. 6. P. 1993–2002.</mixed-citation><mixed-citation xml:lang="en">Tanaka H., Cao Y., Bergstrom D.A. et al. Intrastrand annealing leads to the formation of a large DNA palindrome and determines the boundaries of genomic amplifi cation in human cancer // Mol. Cell. Biol. 2007 . V. 6. P. 1993–2002.</mixed-citation></citation-alternatives></ref><ref id="cit40"><label>40</label><citation-alternatives><mixed-citation xml:lang="ru">Taussig M.J. Molecular genetics of immunoglobulins // Immunol. Suppl. 1988. V. 1. P. 7–15.</mixed-citation><mixed-citation xml:lang="en">Taussig M.J. Molecular genetics of immunoglobulins // Immunol. Suppl. 1988. V. 1. P. 7–15.</mixed-citation></citation-alternatives></ref><ref id="cit41"><label>41</label><citation-alternatives><mixed-citation xml:lang="ru">Tower J. Developmental gene amplifi cation and origin regulation // Annu. Rev. Genet. 2004. V. 38. P. 273–304.</mixed-citation><mixed-citation xml:lang="en">Tower J. Developmental gene amplifi cation and origin regulation // Annu. Rev. Genet. 2004. V. 38. P. 273–304.</mixed-citation></citation-alternatives></ref><ref id="cit42"><label>42</label><citation-alternatives><mixed-citation xml:lang="ru">Tseng H., Chou W., Wang J. et al. Mouse ribosomal RNA genes contain multiple differentially regulated variants // PLoS One. 2008. V. 3. P. e1843.</mixed-citation><mixed-citation xml:lang="en">Tseng H., Chou W., Wang J. et al. Mouse ribosomal RNA genes contain multiple differentially regulated variants // PLoS One. 2008. V. 3. P. e1843.</mixed-citation></citation-alternatives></ref><ref id="cit43"><label>43</label><citation-alternatives><mixed-citation xml:lang="ru">Vassetzky N.S., Ten O.A., Kramerov D.A. B1 and related SINEs in mammalian genomes // Gene. 2003. V. 319. P. 149–160.</mixed-citation><mixed-citation xml:lang="en">Vassetzky N.S., Ten O.A., Kramerov D.A. B1 and related SINEs in mammalian genomes // Gene. 2003. V. 319. P. 149–160.</mixed-citation></citation-alternatives></ref><ref id="cit44"><label>44</label><citation-alternatives><mixed-citation xml:lang="ru">Vatolin S.Y., Okhapkina E.V., Matveeva N.M. et al. Scheduled perturbation in DNA during in vitro differentiation of mouse embryo-derived cells // Mol. Reprod. Dev. 1997. V. 47. Nо. 1. P. 1–10.</mixed-citation><mixed-citation xml:lang="en">Vatolin S.Y., Okhapkina E.V., Matveeva N.M. et al. Scheduled perturbation in DNA during in vitro differentiation of mouse embryo-derived cells // Mol. Reprod. Dev. 1997. V. 47. Nо. 1. P. 1–10.</mixed-citation></citation-alternatives></ref><ref id="cit45"><label>45</label><citation-alternatives><mixed-citation xml:lang="ru">Wang R.C., Smogorzewska A., de Lange T. Homologous recombination generates T-loop-sized deletions at human telomeres // Cell. 2004. V. 119. Nо. 3. P. 355–368.</mixed-citation><mixed-citation xml:lang="en">Wang R.C., Smogorzewska A., de Lange T. Homologous recombination generates T-loop-sized deletions at human telomeres // Cell. 2004. V. 119. Nо. 3. P. 355–368.</mixed-citation></citation-alternatives></ref><ref id="cit46"><label>46</label><citation-alternatives><mixed-citation xml:lang="ru">Warmerdam D.O., Kanaar R. Dealing with DNA damage: relationships between checkpoint and repair pathways // Mutat Res. 2010. V. 704. Nо. 1/3. P. 2–11.</mixed-citation><mixed-citation xml:lang="en">Warmerdam D.O., Kanaar R. Dealing with DNA damage: relationships between checkpoint and repair pathways // Mutat Res. 2010. V. 704. Nо. 1/3. P. 2–11.</mixed-citation></citation-alternatives></ref><ref id="cit47"><label>47</label><citation-alternatives><mixed-citation xml:lang="ru">Yakubov L.A., Rogachev V.A., Likhacheva A.C. et al. Natural human gene correction by small extracellular genomic DNA fragments // Cell Cycle. 2007. V. 6. P. 2293–2301.</mixed-citation><mixed-citation xml:lang="en">Yakubov L.A., Rogachev V.A., Likhacheva A.C. et al. Natural human gene correction by small extracellular genomic DNA fragments // Cell Cycle. 2007. V. 6. P. 2293–2301.</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
