<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.3 20210610//EN" "JATS-journalpublishing1-3.dtd">
<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">vavilov</journal-id><journal-title-group><journal-title xml:lang="ru">Вавиловский журнал генетики и селекции</journal-title><trans-title-group xml:lang="en"><trans-title>Vavilov Journal of Genetics and Breeding</trans-title></trans-title-group></journal-title-group><issn pub-type="epub">2500-3259</issn><publisher><publisher-name>Institute of Cytology and Genetics of Siberian Branch of the RAS</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.18699/VJ18.408</article-id><article-id custom-type="elpub" pub-id-type="custom">vavilov-1650</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ГЕНЕТИЧЕСКИЕ РЕСУРСЫ И БИОКОЛЛЕКЦИИ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>PLANT GENETICS</subject></subj-group></article-categories><title-group><article-title>Полиморфизм генов биосинтеза этилена и экспансина у местных и стародавних сортов яблони  (Malus domestica Borkh.) из коллекции генетических ресурсов растений ВИР</article-title><trans-title-group xml:lang="en"><trans-title>Ethylene and expansin biosynthesis related genes polymorphism in local apple (Malus domestica Borkh.) cultivars from VIR Collection of plant genetic resources</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-4464-1876</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Шамшин</surname><given-names>И. Н.</given-names></name><name name-style="western" xml:lang="en"><surname>Shamshin</surname><given-names>I. N.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Мичуринск.</p></bio><bio xml:lang="en"><p>Michurinsk.</p></bio><email xlink:type="simple">ivan_shamshin@mail.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-8009-6780</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Шлявас</surname><given-names>А. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Shlyavas</surname><given-names>A. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург.</p></bio><bio xml:lang="en"><p>St. Petersburg.</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-9618-5932</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Трифонова</surname><given-names>А. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Trifonova</surname><given-names>A. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Москва.</p></bio><bio xml:lang="en"><p>Moscow.</p></bio><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-8479-4949</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Борис</surname><given-names>К. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Boris</surname><given-names>K. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Москва.</p></bio><bio xml:lang="en"><p>Moscow.</p></bio><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-6029-0730</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Кудрявцев</surname><given-names>А. М.</given-names></name><name name-style="western" xml:lang="en"><surname>Kudryavtsev</surname><given-names>A. M.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Москва.</p></bio><bio xml:lang="en"><p>Moscow.</p></bio><xref ref-type="aff" rid="aff-3"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru">Мичуринский государственный аграрный университет.<country>Россия</country></aff><aff xml:lang="en">Michurinsk State Agrarian University.<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru">Федеральный исследовательский центр Всероссийский институт генетических ресурсов растений им. Н.И. Вавилова (ВИР).<country>Россия</country></aff><aff xml:lang="en">Federal Research Center the N.I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR).<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru">Институт общей генетики им. Н.И. Вавилова Российской академии наук.<country>Россия</country></aff><aff xml:lang="en">Vavilov Institute of General Genetics, RAS.<country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2018</year></pub-date><pub-date pub-type="epub"><day>25</day><month>09</month><year>2018</year></pub-date><volume>22</volume><issue>6</issue><fpage>660</fpage><lpage>666</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Шамшин И.Н., Шлявас А.В., Трифонова А.А., Борис К.В., Кудрявцев А.М., 2018</copyright-statement><copyright-year>2018</copyright-year><copyright-holder xml:lang="ru">Шамшин И.Н., Шлявас А.В., Трифонова А.А., Борис К.В., Кудрявцев А.М.</copyright-holder><copyright-holder xml:lang="en">Shamshin I.N., Shlyavas A.V., Trifonova A.A., Boris K.V., Kudryavtsev A.M.</copyright-holder><license license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://vavilov.elpub.ru/jour/article/view/1650">https://vavilov.elpub.ru/jour/article/view/1650</self-uri><abstract><p>В Пушкинских и Павловских лабораториях Всероссийского института генетических ресурсов растений им. Н.И. Вавилова (ВИР) представлена коллекция разнообразных местных и стародавних сортов яблони. Некоторые из них широко используются в селекционных программах благодаря экологической пластичности, повышенной устойчивости к абиотическому стрессу и болезням, однако масштабных исследований лежкости плодов у местных и стародавних сортов не проводилось. Лежкость плодов является важной проблемой для производителей. Сохранение твердости плодов во время длительного хранения – одно из ключевых требований, предъявляемых к новым сортам яблони. Показано, что гены биосинтеза этилена и экспансина вовлечены в контроль лежкости у яблони, разработаны специфичные молекулярные маркеры для этих генов. В настоящем исследовании проведен анализ аллельного разнообразия генов биосинтеза этилена и экспансина Md-ACS1, Md-ACO1 и Md-Exp7, вовлеченных в контроль лежкости плодов у 87 местных и стародавних сортов яблони из коллекции генетических ресурсов растений ВИР. Были использованы ПЦР-маркеры Md-ACS1, Md-ACO1 и SSR-маркер Md-Exp7. Час-  тоты аллелей в изученной коллекции в целом совпадали с данными предыдущих исследований. Аллель 2 гена Md-ACS1, определяющий сниженный уровень синтеза этилена, был выявлен только у трех образцов, в то время как все изученные местные и стародавние сорта были гетерозиготны по локусу Md-ACO1, так же как и большинство изученных ранее современных отечественных сортов яблони. Половина проанализированных образцов были гетерозиготны по локусу Md-Exp7 (198 : 202). Выявлено 13 местных и стародавних сортов, несущих редкие аллели гена Md-Exp7 (206, 210 и 212). Не было обнаружено связи между сочетанием аллелей гена Md-Exp7 и временем созревания изученных сортов. Полученные результаты могут быть использованы при дополнительной оценке потенциала изученных генотипов яблони для селекции.</p></abstract><trans-abstract xml:lang="en"><p>At Pushkin and Pavlovsk Laboratories of the N.I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR) a diverse collec tion of local apple cultivars is maintained. Some of the cultivars are widely used in breeding programs for their ecological plasticity, increased adaptation to abiotic stress and disease resistance, still there have been no large-scale studies of these local cultivars for fruit storage ability. Fruit softening during storage is an important problem for apple production. Retention of desirable firmness after prolonged storage is one of the key requirements for new apple cultivars. Expansin and ethy lene biosynthesis related genes are known to be involved in control of fruit softening in apple, and gene specific molecular markers have been reported. In this study the polymorphism and allelic configuration of ethylene and expansin biosynthesis related genes Md-ACS1, Md-ACO1 and Md-Exp7 involved in control of fruit softening in 87 local apple cultivars from VIR Collection of Plant Genetic Resources were analyzed. PCR markers Md-ACS1, Md-ACO1 and SSR-marker Md-Exp7 were used in the study. The allele frequencies in the collection generally coincided with the data from previous studies. Md-ACS1 allele 2 associated with reduced ethylene production was found only in three local cultivars, while all the studied local cultivars were heterozygous for the Md-ACO1 locus, as well as most modern Russian apple cultivars. Half of the studied local cultivars were heterozygous for Md-Exp7 (198 : 202). Thirteen local cultivars with rare Md-Exp7 alleles (206, 210 and 212) were detected. No association was found between the Md-Exp7 genotype and the cultivars’ maturation time. The obtained results can be used for additional evaluation of the cultivars’ potential for breeding.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>яблоня</kwd><kwd>местные и стародавние сорта</kwd><kwd>синтез этилена</kwd><kwd>экспансин</kwd><kwd>лежкость плодов</kwd><kwd>маркер-ассоциированная селекция</kwd></kwd-group><kwd-group xml:lang="en"><kwd>apple</kwd><kwd>local cultivars</kwd><kwd>ethylene production</kwd><kwd>expansin</kwd><kwd>fruit softening</kwd><kwd>marker assisted breeding</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Bratilova N.P., Moksina N.V., Gerasimova O.A., Chepelev N.L. Stages of picking and storage for different cultivars of apple fruit in the Botanical garden named after V.M. Krutovsky. The Bulletin of KrasGAU. 2015;11:146-150.</mixed-citation><mixed-citation xml:lang="en">Bratilova N.P., Moksina N.V., Gerasimova O.A., Chepelev N.L. Stages of picking and storage for different cultivars of apple fruit in the Botanical garden named after V.M. Krutovsky. The Bulletin of KrasGAU. 2015;11:146-150.</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Costa F., Peace C.P., Stella S., Serra S., Musacchi S., Bazzani M., Sansavini S., Van de Weg W.E. QTL dynamics for fruit firmness and softening around an ethylene-dependent polygalacturonase gene in apple (Malus × domestica Borkh.). J. Expt. Bot. 2010;61(11):30293039. DOI 10.1093/jxb/erq130.</mixed-citation><mixed-citation xml:lang="en">Costa F., Peace C.P., Stella S., Serra S., Musacchi S., Bazzani M., Sansavini S., Van de Weg W.E. QTL dynamics for fruit firmness and softening around an ethylene-dependent polygalacturonase gene in apple (Malus × domestica Borkh.). J. Expt. Bot. 2010;61(11):30293039. DOI 10.1093/jxb/erq130.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Costa F., Stella S., Van de Weg W.E., Guerra W., Cecchinel M., Dallavia J., Koller B., Sansavini S. Role of the genes Md-ACOl and MdACSl in ethylene production and shelf life of apple (Malus domestica Borkh.). Euphytica. 2005;141:181-190. DOI 10.1007/s10681-0056805-4.</mixed-citation><mixed-citation xml:lang="en">Costa F., Stella S., Van de Weg W.E., Guerra W., Cecchinel M., Dallavia J., Koller B., Sansavini S. Role of the genes Md-ACOl and MdACSl in ethylene production and shelf life of apple (Malus domestica Borkh.). Euphytica. 2005;141:181-190. DOI 10.1007/s10681-0056805-4.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Costa F., Van de Weg W.E., Stella S., Dondini L., Pratesi D., Musacchi S., Sansavini S. Map position and functional allelic diversity of Md-Exp7, a new putative expansin gene associated with fruit softening in apple (Malus × domestica Borkh.) and pear (Pyrus communis). Tree Genet. Genomes. 2008;4:575-586. DOI 10.1007/s11295-0080133-5.</mixed-citation><mixed-citation xml:lang="en">Costa F., Van de Weg W.E., Stella S., Dondini L., Pratesi D., Musacchi S., Sansavini S. Map position and functional allelic diversity of Md-Exp7, a new putative expansin gene associated with fruit softening in apple (Malus × domestica Borkh.) and pear (Pyrus communis). Tree Genet. Genomes. 2008;4:575-586. DOI 10.1007/s11295-0080133-5.</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Harada T., Sunako T., Wakasa Y., Soejima J., Satoh T., Niizeki M. An allele of 1-aminocyclopropane-1-carboxylate synthase gene (MdACS1) accounts for the low ethylene production in climacteric fruits of some apple cultivars. Theor. Appl. Genet. 2000;101:742-746. DOI 10.1007/s001220051539.</mixed-citation><mixed-citation xml:lang="en">Harada T., Sunako T., Wakasa Y., Soejima J., Satoh T., Niizeki M. An allele of 1-aminocyclopropane-1-carboxylate synthase gene (MdACS1) accounts for the low ethylene production in climacteric fruits of some apple cultivars. Theor. Appl. Genet. 2000;101:742-746. DOI 10.1007/s001220051539.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Nybom H., Ahmadi-Afzadi M., Garkava-Gustavsson L., Sehic J., Tahir I. Selection for improved fruit texture and storability in apple. Acta Hort. 2012;934(2):849-854. DOI 10.17660/ActaHortic.2012.934.112.</mixed-citation><mixed-citation xml:lang="en">Nybom H., Ahmadi-Afzadi M., Garkava-Gustavsson L., Sehic J., Tahir I. Selection for improved fruit texture and storability in apple. Acta Hort. 2012;934(2):849-854. DOI 10.17660/ActaHortic.2012.934.112.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Nybom H., Ahmadi-Afzadi M., Sehic J., Hertog M. DNA marker-assisted evaluation of fruit firmness at harvest and post-harvest fruit softening in a diverse apple germplasm. Tree Genet. Genomes. 2013;9:279-290. DOI 10.1007/s11295-012-0554-z.</mixed-citation><mixed-citation xml:lang="en">Nybom H., Ahmadi-Afzadi M., Sehic J., Hertog M. DNA marker-assisted evaluation of fruit firmness at harvest and post-harvest fruit softening in a diverse apple germplasm. Tree Genet. Genomes. 2013;9:279-290. DOI 10.1007/s11295-012-0554-z.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Nybom H., Sehic J., Garkava-Gustavsson L. Modern apple breeding is associated with a significant change in allelic ratio of the ethylene production gene Md-ACS1. J. Hortic. Sci. Biotechnol. 2008;83:673677. DOI 10.1080/14620316.2008.11512442.</mixed-citation><mixed-citation xml:lang="en">Nybom H., Sehic J., Garkava-Gustavsson L. Modern apple breeding is associated with a significant change in allelic ratio of the ethylene production gene Md-ACS1. J. Hortic. Sci. Biotechnol. 2008;83:673677. DOI 10.1080/14620316.2008.11512442.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Oraguzie N.C., Iwanami H., Soejima J., Harada T., Hall A. Inheritance of Md-ACS1 gene and its relationship to fruit softening in apple (Malus × domestica Borkh.). Theor. Appl. Genet. 2004;108:1526-1533. DOI 10.1007/s00122-003-1574-8.</mixed-citation><mixed-citation xml:lang="en">Oraguzie N.C., Iwanami H., Soejima J., Harada T., Hall A. Inheritance of Md-ACS1 gene and its relationship to fruit softening in apple (Malus × domestica Borkh.). Theor. Appl. Genet. 2004;108:1526-1533. DOI 10.1007/s00122-003-1574-8.</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Oraguzie N.C., Volz R.K., Whitworth C.J., Bassett H.C.M., Hall A.J., Gardiner S. Influence of Md-ACS1 allelotype and harvest season within an apple germplasm collection on fruit softening during cold air storage. Postharvest Biol. Technol. 2007;44:212-219. DOI 10.1016/j.postharvbio.2006.12.013.</mixed-citation><mixed-citation xml:lang="en">Oraguzie N.C., Volz R.K., Whitworth C.J., Bassett H.C.M., Hall A.J., Gardiner S. Influence of Md-ACS1 allelotype and harvest season within an apple germplasm collection on fruit softening during cold air storage. Postharvest Biol. Technol. 2007;44:212-219. DOI 10.1016/j.postharvbio.2006.12.013.</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Savel’ev N.I., Shamshin I.N., Kudryavtzev A.M. Apples for the alleles of genes of shelf life and quality of fruits. Reports of the Russian Academy of Agricultural Sciences. 2014a;3:17-20.</mixed-citation><mixed-citation xml:lang="en">Savel’ev N.I., Shamshin I.N., Kudryavtzev A.M. Apples for the alleles of genes of shelf life and quality of fruits. Reports of the Russian Academy of Agricultural Sciences. 2014a;3:17-20.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Savel’ev N.I., Shamshin I.N., Savel’eva N.N., Lyzhin A.S. Polymorphism for the MD-EXP-7 gene for expansin biosynthesis in wild species of the genus Malus Mill. Vavilovskii Zhurnal Genetiki i Selektsii = Vavilov Journal of Genetics and Breeding. 2014b;18(4/1): 713-717.</mixed-citation><mixed-citation xml:lang="en">Savel’ev N.I., Shamshin I.N., Savel’eva N.N., Lyzhin A.S. Polymorphism for the MD-EXP-7 gene for expansin biosynthesis in wild species of the genus Malus Mill. Vavilovskii Zhurnal Genetiki i Selektsii = Vavilov Journal of Genetics and Breeding. 2014b;18(4/1): 713-717.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Shamshin I.N., Savelieva N.N. Identifying the gene sources for ethylene biosynthesis (MD-ACS1 and MD-ACO1) in genoplasm of wild apple tree species of the genus Malus (L.) Mill. Herald of the Russian Academy of Agricultural Sciences. 2014;4:35-37.</mixed-citation><mixed-citation xml:lang="en">Shamshin I.N., Savelieva N.N. Identifying the gene sources for ethylene biosynthesis (MD-ACS1 and MD-ACO1) in genoplasm of wild apple tree species of the genus Malus (L.) Mill. Herald of the Russian Academy of Agricultural Sciences. 2014;4:35-37.</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Sunako T., Sakuraba W., Senda M., Akada S., Ishikawa R., Niizeki M., Harada T. An allele of the ripening-specific 1-amino-cyclopropane1-carboxylic acid synthase (ACS1) in apple fruit with a long storage life. Plant Physiol. 1999;119(4):1297-1304. DOI 10.1104/pp.119.4. 1297.</mixed-citation><mixed-citation xml:lang="en">Sunako T., Sakuraba W., Senda M., Akada S., Ishikawa R., Niizeki M., Harada T. An allele of the ripening-specific 1-amino-cyclopropane1-carboxylic acid synthase (ACS1) in apple fruit with a long storage life. Plant Physiol. 1999;119(4):1297-1304. DOI 10.1104/pp.119.4. 1297.</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Suprun I.I., Tokmakov S.V. Allelic diversity of ethylene biosynthesis related MD-ACS1 and MD-ACO1 genes in Russian apple germplasm. Vavilovskii Zhurnal Genetiki i Selektsii = Vavilov Journal of Genetics and Breeding. 2013;17(23):298-302.</mixed-citation><mixed-citation xml:lang="en">Suprun I.I., Tokmakov S.V. Allelic diversity of ethylene biosynthesis related MD-ACS1 and MD-ACO1 genes in Russian apple germplasm. Vavilovskii Zhurnal Genetiki i Selektsii = Vavilov Journal of Genetics and Breeding. 2013;17(23):298-302.</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Zhu Y., Barritt B.H. Md-ACS1 and Md-ACO1 genotyping of apple (Malus × domestica Borkh.) breeding parents and suitability for marker-assisted selection. Tree Genet. Genomes. 2008;4:555-562. DOI 10.1007/s11295-007-0131-z.</mixed-citation><mixed-citation xml:lang="en">Zhu Y., Barritt B.H. Md-ACS1 and Md-ACO1 genotyping of apple (Malus × domestica Borkh.) breeding parents and suitability for  marker-assisted selection. Tree Genet. Genomes. 2008;4:555-562. DOI 10.1007/s11295-007-0131-z.</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
