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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">vavilov</journal-id><journal-title-group><journal-title xml:lang="ru">Вавиловский журнал генетики и селекции</journal-title><trans-title-group xml:lang="en"><trans-title>Vavilov Journal of Genetics and Breeding</trans-title></trans-title-group></journal-title-group><issn pub-type="epub">2500-3259</issn><publisher><publisher-name>Institute of Cytology and Genetics of Siberian Branch of the RAS</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.18699/VJ19.576</article-id><article-id custom-type="elpub" pub-id-type="custom">vavilov-2393</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ГЕНЕТИКА И СЕЛЕКЦИЯ РАСТЕНИЙ НА ИММУНИТЕТ, КАЧЕСТВО, ПРОДУКТИВНОСТЬ И СТРЕССОУСТОЙЧИВОСТЬ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>ANIMAL GENETICS AND BREEDING</subject></subj-group></article-categories><title-group><article-title>Ассоциация однонуклеотидного полиморфизма rs110861313 в межгенном районе хромосомы 23 с развитием лейкоза у крупного рогатого скота черно-пестрой породы</article-title><trans-title-group xml:lang="en"><trans-title>Single nucleotide polymorphism rs110861313 in the intergenic region of chromosome 23 is associated with the development of leukosis in the Russian Black Pied cattle</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Айтназаров</surname><given-names>Р. Б.</given-names></name><name name-style="western" xml:lang="en"><surname>Aitnazarov</surname><given-names>R. B.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-8588-6511</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Игнатьева</surname><given-names>Е. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Ignatieva</surname><given-names>E. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Агаркова</surname><given-names>Т. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Agarkova</surname><given-names>T. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>р. п. Краснообск, Новосибирская область</p></bio><bio xml:lang="en"><p>Krasnoobsk, Novosibirsk region</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Двоеглазов</surname><given-names>Н. Г.</given-names></name><name name-style="western" xml:lang="en"><surname>Dvoeglazov</surname><given-names>N. G.</given-names></name></name-alternatives><bio xml:lang="ru"><p>р. п. Краснообск, Новосибирская область</p></bio><bio xml:lang="en"><p>Krasnoobsk, Novosibirsk region</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Осипова</surname><given-names>Н. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Osipova</surname><given-names>N. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>р. п. Краснообск, Новосибирская область</p></bio><bio xml:lang="en"><p>Krasnoobsk, Novosibirsk region</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Храмцов</surname><given-names>В. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Khramtsov</surname><given-names>V. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>р. п. Краснообск, Новосибирская область</p></bio><bio xml:lang="en"><p>Krasnoobsk, Novosibirsk region</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-1947-5554</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Юдин</surname><given-names>Н. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Yudin</surname><given-names>N. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><email xlink:type="simple">yudin@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru">Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук; Новосибирский национальный исследовательский государственный университет<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics, SB RAS; Novosibirsk State University<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru">Сибирский федеральный научный центр агробиотехнологий Российской академии наук<country>Россия</country></aff><aff xml:lang="en">Siberian Federal Research Center for AgroBioTechnologies, RAS<country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2019</year></pub-date><pub-date pub-type="epub"><day>09</day><month>01</month><year>2020</year></pub-date><volume>23</volume><issue>8</issue><fpage>999</fpage><lpage>1005</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Айтназаров Р.Б., Игнатьева Е.В., Агаркова Т.А., Двоеглазов Н.Г., Осипова Н.А., Храмцов В.В., Юдин Н.С., 2020</copyright-statement><copyright-year>2020</copyright-year><copyright-holder xml:lang="ru">Айтназаров Р.Б., Игнатьева Е.В., Агаркова Т.А., Двоеглазов Н.Г., Осипова Н.А., Храмцов В.В., Юдин Н.С.</copyright-holder><copyright-holder xml:lang="en">Aitnazarov R.B., Ignatieva E.V., Agarkova T.A., Dvoeglazov N.G., Osipova N.A., Khramtsov V.V., Yudin N.S.</copyright-holder><license license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://vavilov.elpub.ru/jour/article/view/2393">https://vavilov.elpub.ru/jour/article/view/2393</self-uri><abstract><p>Недавно с помощью полногеномного анализа ассоциаций было идентифицировано несколько однонуклеотидных полиморфизмов (ОНП), связанных с чувствительностью крупного рогатого скота (КРС) к лейкозу. Однако все эти исследования были выполнены на животных голштинской породы и их гибридах. В связи с этим актуальна проверка информативности выявленных ранее генетических маркеров для российских пород КРС. Целью исследования была проверка ассоциации ОНП rs110861313 в межгенном участке хромосомы 23 с лейкозом у черно-пестрой породы КРС. При гематологическом исследовании крови животных, в сыворотке крови которых серологическими методами обнаружены специфические антитела к вирусу лейкоза КРС, были сформированы три группы: здоровые животные (n = 115), бессимптомные вирусоносители (n = 145) и больные лейкозом животные с персистентным лимфоцитозом (n = 107). Генотипирование ОНП rs110861313 проводили с использованием полимеразной цепной реакции с последующим анализом полиморфизма длин рестрикционных фрагментов. Выявлено достоверное снижение частоты генотипа А/А (11.2 %) у животных с персистентным лимфоцитозом по сравнению с вирусоносителями (27.6 %) (p &lt; 0.002). Частота животных с генотипом С/С у животных с персистентным лимфоцитозом (41.1 %) была достоверно выше, чем у вирусоносителей (21.4 %) (p &lt; 0.001). При этом бессимптомных вирусоносителей можно считать более адекватным контролем, чем здоровых, но не контактировавших с вирусом животных. По данным биоинформатического анализа, устойчивость к инфекции вирусом лейкоза КРС может быть связана с наличием в районе ОНП rs110861313 сайта связывания транскрипционного фактора FOXM1, который экспрессируется в клетках иммунной системы и потенциально может влиять на экспрессию ближайших генов (LY6G5B, GPANK1, ABHD16A, LY6G6F, LY6G6E, CSNK2B, ApoM). Таким образом, нами установлено, что ОНП rs110861313 в межгенном участке хромосомы 23 ассоциирован с развитием лейкоза при инфицировании вирусом лейкоза у животных черно-пестрой породы КРС.</p></abstract><trans-abstract xml:lang="en"><p>In recent years, using a genome-wide association study (GWAS), a number of single nucleotide polymorphisms (SNPs) have been suggested to be associated with susceptibility to leukemia in cattle. However, all studies have been done with purebred Holstein cows and their hybrids. In this regard, it is important to confirm the functional role of polymorphisms previously identified in a GWAS study in Russian cattle breeds. The aim of this study was to verify the association between rs110861313 in the intergenic region of bovine chromosome 23 and leukemia in the Russian Black Pied cattle. Based on the levels of bovine leukemia virus (BLV)-specific antibodies detected in serum using serodiagnostic techniques, animals were divided into three groups: healthy animals (n = 115), asymptomatic virus carriers (n = 145) and animals with leukemia (n = 107). Genotyping of rs110861313 was carried out using polymerase chain reaction followed by analysis of restriction fragment length polymorphisms. A significant decrease in the frequency of the A/A genotype (11.2 %) was revealed in animals with persistent lymphocytosis compared to virus carriers (27.6 %) (p &lt; 0.002). At the same time, the frequency of animals with the C/C genotype in animals with persistent lymphocytosis (41.1 %) was significantly higher than that of virus carriers (21.4 %) (p &lt; 0.001). In this case, asymptomatic virus carriers can be considered a more suitable control than healthy animals that have not been in contact with the virus. According to bioinformatics analysis, resistance to BLV can be due to the presence of the transcription factor FOXM1 binding site in the region of rs110861313. FOXM1 is expressed in immune cells and can potentially affect the expression of the neighboring genes (LY6G5B, GPANK1, ABHD16A, LY6G6F, LY6G6E, CSNK2B, ApoM). Thus, we found that SNP rs110861313 in the intergenic region of bovine chromosome 23 is associated with the development of leukemia following BLV infection in the Russian Black Pied cattle.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>крупный рогатый скот</kwd><kwd>черно-пестрая порода</kwd><kwd>лейкоз</kwd><kwd>вирусоноситель</kwd><kwd>персистентный лимфоцитоз</kwd><kwd>однонуклеотидный полиморфизм</kwd><kwd>rs110861313</kwd><kwd>ассоциация</kwd></kwd-group><kwd-group xml:lang="en"><kwd>cattle</kwd><kwd>Russian Black Pied cattle</kwd><kwd>bovine leucosis</kwd><kwd>virus carrier</kwd><kwd>persistent lymphocytosis</kwd><kwd>single nucleotide polymorphism</kwd><kwd>rs110861313</kwd><kwd>association</kwd></kwd-group><funding-group xml:lang="ru"><funding-statement>This work was supported by the Integrated Program of Basic Research, SB RAS.</funding-statement></funding-group><funding-group xml:lang="en"><funding-statement>This work was supported by the Integrated Program of Basic Research, SB RAS.</funding-statement></funding-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Володина Ю.Л., Штиль А.А. 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