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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">vavilov</journal-id><journal-title-group><journal-title xml:lang="ru">Вавиловский журнал генетики и селекции</journal-title><trans-title-group xml:lang="en"><trans-title>Vavilov Journal of Genetics and Breeding</trans-title></trans-title-group></journal-title-group><issn pub-type="epub">2500-3259</issn><publisher><publisher-name>Institute of Cytology and Genetics of Siberian Branch of the RAS</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.18699/vjgb-25-22</article-id><article-id custom-type="elpub" pub-id-type="custom">vavilov-4537</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>КЛЕТОЧНАЯ БИОЛОГИЯ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>CELL BIOLOGY</subject></subj-group></article-categories><title-group><article-title>Изогенная линия индуцированных плюрипотентных стволовых клеток ICGi036-A-1 от пациента с семейной гиперхолестеринемией, созданная путем коррекции патогенного варианта гена LDLR c.530C&gt;T</article-title><trans-title-group xml:lang="en"><trans-title>Isogenic induced pluripotent stem cell line ICGi036-A-1 from a patient with familial hypercholesterolaemia, derived by correcting a pathogenic variant of the gene LDLR c.530C&gt;T</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Зуева</surname><given-names>А. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Zueva</surname><given-names>A. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Шевченко</surname><given-names>А. И.</given-names></name><name name-style="western" xml:lang="en"><surname>Shevchenko</surname><given-names>A. I.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Медведев</surname><given-names>С. П.</given-names></name><name name-style="western" xml:lang="en"><surname>Medvedev</surname><given-names>S. P.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Елисафенко</surname><given-names>Е. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Elisaphenko</surname><given-names>E. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Слепцов</surname><given-names>А. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Sleptcov</surname><given-names>A. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск; Томск</p></bio><bio xml:lang="en"><p>Novosibirsk; Tomsk</p></bio><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Назаренко</surname><given-names>М. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Nazarenko</surname><given-names>M. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск; Томск</p></bio><bio xml:lang="en"><p>Novosibirsk; Tomsk</p></bio><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Тмоян</surname><given-names>Н. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Tmoyan</surname><given-names>N. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск;Москва</p></bio><bio xml:lang="en"><p>Novosibirsk; Moscow</p></bio><xref ref-type="aff" rid="aff-4"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Закиян</surname><given-names>С. М.</given-names></name><name name-style="western" xml:lang="en"><surname>Zakian</surname><given-names>S. M.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Захарова</surname><given-names>И. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Zakharova</surname><given-names>I. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новосибирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><email xlink:type="simple">zakharova@bionet.nsc.ru</email><xref ref-type="aff" rid="aff-2"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru">Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук; Новосибирский национальный исследовательский государственный университет<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences; Novosibirsk State University<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru">Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru">Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук; Научно-исследовательский институт медицинской генетики, Томский национальный исследовательский медицинский центр Российской академии наук<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences; Research Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-4"><aff xml:lang="ru">Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук;Национальный медицинский исследовательский центр кардиологии имени академика Е.И. Чазова Министерства здравоохранения Российской Федерации<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences; National Medical Research Center of Cardiology named after academician E.I. Chazov<country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2025</year></pub-date><pub-date pub-type="epub"><day>10</day><month>04</month><year>2025</year></pub-date><volume>29</volume><issue>2</issue><fpage>189</fpage><lpage>199</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Зуева А.С., Шевченко А.И., Медведев С.П., Елисафенко Е.А., Слепцов А.А., Назаренко М.С., Тмоян Н.А., Закиян С.М., Захарова И.С., 2025</copyright-statement><copyright-year>2025</copyright-year><copyright-holder xml:lang="ru">Зуева А.С., Шевченко А.И., Медведев С.П., Елисафенко Е.А., Слепцов А.А., Назаренко М.С., Тмоян Н.А., Закиян С.М., Захарова И.С.</copyright-holder><copyright-holder xml:lang="en">Zueva A.S., Shevchenko A.I., Medvedev S.P., Elisaphenko E.A., Sleptcov A.A., Nazarenko M.S., Tmoyan N.A., Zakian S.M., Zakharova I.S.</copyright-holder><license license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://vavilov.elpub.ru/jour/article/view/4537">https://vavilov.elpub.ru/jour/article/view/4537</self-uri><abstract><p>Семейная гиперхолестеринемия является распространенным моногенным заболеванием, которое характеризуется повышенным содержанием холестерина в плазме крови, приводящим к хроническим заболеваниям сердечно-сосудистой системы с высоким риском и ранним проявлением развития патологий, вызванных атеросклеротическими поражениями кровеносных сосудов. Образование атеросклеротических бляшек при семейной гиперхолестеринемии в основном обусловлено патогенными вариантами гена рецептора липопротеинов низкой плотности LDLR (low-density lipoprotein receptor), играющего важную роль в метаболизме холестерина. В норме липопротеины низкой плотности, переносящие холестерин, связываются с рецептором LDLR на поверхности клеток печени и выводятся из кровотока путем интернализации гепатоцитами. При семейной гиперхолестеринемии происходит нарушение функционирования рецептора и значительное снижение интернализации липопротеинов низкой плотности. Это приводит к их накоплению в субэндотелиальном пространстве внутренней стенки кровеносных сосудов и вызывает атерогенез – образование атеросклеротических бляшек. На сегодняшний день не существует эффективных и универсальных подходов к диагностике и лечению семейной гиперхолестеринемии. Актуальным подходом для исследования молекулярно-генетических особенностей заболевания и разработки систем скрининга химических соединений – потенциальных лекарственных препаратов – является создание клеточных моделей на основе индуцированных плюрипотентных стволовых клеток (ИПСК) пациентов. Целью нашей работы было создание изогенной генетически модифицированной линии индуцированных плюрипотентных стволовых клеток путем коррекции патогенного аллельного варианта c.530C гена LDLR в линии ИПСК, полученной ранее от пациента-компаундной гетерозиготы с семейной гиперхолестеринемией. Созданная изогенная клеточная линия ИПСК отличается от исходной только одной скорректированной нуклеотидной заменой, что позволяет исследовать непосредственное влияние данного патогенного генетического варианта на физиологические изменения в релевантных дифференцированных клетках. Для коррекции однонуклеотидных замен использован CRISPR/Cas9-опосредованный метод редактирования оснований. Полученная генетически модифицированная линия ИПСК обладает свойствами плюрипотентности, имеет нормальный кариотип, идентичный исходной линии набор коротких тандемных повторов и может быть использована для формирования дифференцированных производных, необходимых при разработке релевантных клеточных моделей.</p></abstract><trans-abstract xml:lang="en"><p>Familial hypercholesterolaemia is a common monogenic disorder characterized by high plasma cholesterol levels leading to chronic cardiovascular disease with high risk and often early manifestation due to atherosclerotic lesions of the blood vessels. The atherosclerotic lesions in familial hypercholesterolaemia are mainly caused by pathogenic variants of the low-density lipoprotein receptor (LDLR) gene, which plays an important role in cholesterol metabolism. Normally, cholesterol-laden low-density lipoproteins bind to the LDLR receptor on the surface of liver cells to be removed from the bloodstream by internalisation with hepatocytes. In familial hypercholesterolaemia, the function of the receptor is impaired and the uptake of low-density lipoproteins is significantly reduced. As a result, cholesterol accumulates in the subendothelial space on the inner wall of blood vessels, triggering atherogenesis, the formation of atherosclerotic plaques. At present, there are no effective and universal approaches to the diagnosis and treatment of familial hypercholesterolaemia. A relevant approach to study the molecular genetic mechanisms of the disease and to obtain systems for screening chemical compounds as potential drugs is the generation of cellular models based on patient-specific induced pluripotent stem cells. The aim of our work was to derive an isogenic genetically modified induced pluripotent stem cell line by correcting the pathogenic allelic variant c.530C of the LDLR gene in the original iPSC previously obtained from a compound heterozygote patient with familial hypercholesterolaemia. The resulting isogenic iPSC line differs from the original by only one corrected nucleotide substitution, allowing us to study the direct effect of this pathogenic genetic variant on physiological changes in relevant differentiated cells. CRISPR/Cas-mediated base editing was used to correct the single nucleotide substitution. The resulting genetically modified iPSC line has pluripotency traits, a normal karyotype, a set of short tandem repeats identical to that in the original line and can be used to obtain differentiated derivatives necessary for the elaboration of relevant cell models.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>семейная гиперхолестеринемия</kwd><kwd>LDLR</kwd><kwd>индуцированные плюрипотентные стволовые клетки</kwd><kwd>геномное редактирование</kwd><kwd>изогенные линии клеток</kwd></kwd-group><kwd-group xml:lang="en"><kwd>familial hypercholesterolaemia</kwd><kwd>LDLR</kwd><kwd>induced pluripotent stem cells</kwd><kwd>genome editing</kwd><kwd>isogenic cell lines</kwd></kwd-group><funding-group xml:lang="en"><funding-statement>The work was supported by the Russian Science Foundation grant No. 24-15-00346, https://rscf.ru/project/ 24-15-00346/.</funding-statement></funding-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Bauer D.E., Canver M.C., Orkin S.H. 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