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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">vavilov</journal-id><journal-title-group><journal-title xml:lang="ru">Вавиловский журнал генетики и селекции</journal-title><trans-title-group xml:lang="en"><trans-title>Vavilov Journal of Genetics and Breeding</trans-title></trans-title-group></journal-title-group><issn pub-type="epub">2500-3259</issn><publisher><publisher-name>Institute of Cytology and Genetics of Siberian Branch of the RAS</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.18699/vjgb-25-52</article-id><article-id custom-type="elpub" pub-id-type="custom">vavilov-4674</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>МОЛЕКУЛЯРНАЯ И КЛЕТОЧНАЯ БИОЛОГИЯ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>MOLECULAR AND CELL BIOLOGY</subject></subj-group></article-categories><title-group><article-title>Концепция природной реконструкции генома. Часть 3. Анализ изменения количества теломерной ДНК в клетках колоний как нового амплифицированного признака, возникшего при обработке гемопоэтических стволовых клеток костного мозга</article-title><trans-title-group xml:lang="en"><trans-title>Concept of natural genome reconstruction. Part 3. Analysis of changes in the amount of telomeric DNA in colony cells as a new amplified feature that arose during the processing of hematopoietic bone marrow stem cells</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Рузанова</surname><given-names>В. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Ruzanova</surname><given-names>V. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Ошихмина</surname><given-names>С. Г.</given-names></name><name name-style="western" xml:lang="en"><surname>Oshikhmina</surname><given-names>S. G.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Риттер</surname><given-names>Г. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Ritter</surname><given-names>G. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Долгова</surname><given-names>Е. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Dolgova</surname><given-names>E. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Кирикович</surname><given-names>С. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Kirikovich</surname><given-names>S. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Левитес</surname><given-names>Е. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Levites</surname><given-names>E. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Ефремов</surname><given-names>Я. Р.</given-names></name><name name-style="western" xml:lang="en"><surname>Efremov</surname><given-names>Y. R.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Карамышева</surname><given-names>Т. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Karamysheva</surname><given-names>T. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Богомолов</surname><given-names>А. Г.</given-names></name><name name-style="western" xml:lang="en"><surname>Bogomolov</surname><given-names>A. G.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Мещанинова</surname><given-names>М. И.</given-names></name><name name-style="western" xml:lang="en"><surname>Meschaninova</surname><given-names>M. I.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Мамаев</surname><given-names>А. Л.</given-names></name><name name-style="western" xml:lang="en"><surname>Mamaev</surname><given-names>A. L.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-4"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Таранов</surname><given-names>О. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Taranov</surname><given-names>O. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>р. п. Кольцово, Новоси6ирская о6ласть</p></bio><bio xml:lang="en"><p>Koltsovo, Novosibirsk region</p></bio><xref ref-type="aff" rid="aff-5"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Сидоров</surname><given-names>С. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Sidorov</surname><given-names>S. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-6"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Никонов</surname><given-names>С. Д.</given-names></name><name name-style="western" xml:lang="en"><surname>Nikonov</surname><given-names>S. D.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-7"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Леплина</surname><given-names>О. Ю.</given-names></name><name name-style="western" xml:lang="en"><surname>Leplina</surname><given-names>O. Y.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-8"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Останин</surname><given-names>А. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Ostanin</surname><given-names>A. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-8"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Черных</surname><given-names>Е. Р.</given-names></name><name name-style="western" xml:lang="en"><surname>Chernykh</surname><given-names>E. R.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-8"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Колчанов</surname><given-names>Н. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Kolchanov</surname><given-names>N. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Проскурина</surname><given-names>А. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Proskurina</surname><given-names>A. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Богачев</surname><given-names>С. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Bogachev</surname><given-names>S. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Новоси6ирск</p></bio><bio xml:lang="en"><p>Novosibirsk</p></bio><email xlink:type="simple">labmolbiol@mail.ru</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru">Федеральный исследовательский центр Институт цитологии и генетики Си6ирского отделения Российской академии наук<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru">Федеральный исследовательский центр Институт цитологии и генетики Си6ирского отделения Российской академии наук;&#13;
Новоси6ирский национальный исследовательский государственный университет<country>Россия</country></aff><aff xml:lang="en">Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences;&#13;
Novosibirsk State University<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru">Институт химической 6иологии и фундаментальной медицины Си6ирского отделения Российской академии наук<country>Россия</country></aff><aff xml:lang="en">Institute of Chemical Biology and Fundamental Medicine of the Siberian Branch of the Russian Academy of Sciences<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-4"><aff xml:lang="ru">OOO «Ла6оратория Ангиофарм»<country>Россия</country></aff><aff xml:lang="en">Laboratory Angiopharm LLC<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-5"><aff xml:lang="ru">Государственный научный центр вирусологии и 6иотехнологии «Bектор» Роспотре6надзора<country>Россия</country></aff><aff xml:lang="en">State Scientific Center of Virology and Biotechnology “Vector” of Rospotrebnadzor<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-6"><aff xml:lang="ru">Новоси6ирский национальный исследовательский государственный университет;&#13;
Городская клиническая 6ольница № 1<country>Россия</country></aff><aff xml:lang="en">Novosibirsk State University;&#13;
City Clinical Hospital No. 1<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-7"><aff xml:lang="ru">Новоси6ирский научно-исследовательский институт ту6еркулеза<country>Россия</country></aff><aff xml:lang="en">Novosibirsk Tuberculosis Research Institute<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-8"><aff xml:lang="ru">Научно-исследовательский институт фундаментальной и клинической иммунологии<country>Россия</country></aff><aff xml:lang="en">Research Institute of Fundamental and Clinical Immunology<country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2025</year></pub-date><pub-date pub-type="epub"><day>20</day><month>07</month><year>2025</year></pub-date><volume>29</volume><issue>4</issue><fpage>479</fpage><lpage>495</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Рузанова В.С., Ошихмина С.Г., Риттер Г.С., Долгова Е.В., Кирикович С.С., Левитес Е.В., Ефремов Я.Р., Карамышева Т.В., Богомолов А.Г., Мещанинова М.И., Мамаев А.Л., Таранов О.С., Сидоров С.В., Никонов С.Д., Леплина О.Ю., Останин А.А., Черных Е.Р., Колчанов Н.А., Проскурина А.С., Богачев С.С., 2025</copyright-statement><copyright-year>2025</copyright-year><copyright-holder xml:lang="ru">Рузанова В.С., Ошихмина С.Г., Риттер Г.С., Долгова Е.В., Кирикович С.С., Левитес Е.В., Ефремов Я.Р., Карамышева Т.В., Богомолов А.Г., Мещанинова М.И., Мамаев А.Л., Таранов О.С., Сидоров С.В., Никонов С.Д., Леплина О.Ю., Останин А.А., Черных Е.Р., Колчанов Н.А., Проскурина А.С., Богачев С.С.</copyright-holder><copyright-holder xml:lang="en">Ruzanova V.S., Oshikhmina S.G., Ritter G.S., Dolgova E.V., Kirikovich S.S., Levites E.V., Efremov Y.R., Karamysheva T.V., Bogomolov A.G., Meschaninova M.I., Mamaev A.L., Taranov O.S., Sidorov S.V., Nikonov S.D., Leplina O.Y., Ostanin A.A., Chernykh E.R., Kolchanov N.A., Proskurina A.S., Bogachev S.S.</copyright-holder><license license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://vavilov.elpub.ru/jour/article/view/4674">https://vavilov.elpub.ru/jour/article/view/4674</self-uri><abstract><p>Индуцированная «реком6иногенная ситуация» в гемопоэтических стволовых клетках и активация репаративных систем клетки создают основу для реком6инационных со6ытий между доставленными в клетку фрагментами экстраклеточной двуцепочечной ДНК и ДНК хромосом или иных форм репаративно-реком6инационного процесса. На модельных организмах мыши и крысы, а также с использованием в качестве исходного материала клеток костного мозга человека 6ыло оценено изменение количества теломерной ДНК в гемопоэтических стволовых клетках как показатель произошедших репарационно-реком6инационных со6ытий. Bо всех проведенных экспериментах в качестве фактора сравнения использовался ангиогенин реком6инантный человеческий. Методом дот-6лот ги6ридизации показано, что в клетках колоний, полученных из клеток костного мозга модельных организмов, а также из клеток о6разцов костного мозга человека, о6ра6отанных препаратом двуцепочечной ДНК, произошло достоверное увеличение количества теломерной ДНК. Амплификация теломерной ДНК в клетках колоний не связана с контаминацией препаратом исходной ДНК, которым о6ра6атывались клетки костного мозга. O6ра6отка клеток костного мозга ДНК, не несущей теломерных последовательностей (AluI ПЦР-фрагмент), не приводит к увеличению количества теломерной ДНК в клетках выросших колоний. Это предполагает участие в амплификации теломерной ДНК экстрахромосомальной ДНК-матрицы, несущей ДНК теломер. Установлено, что о6ра6отка клеток костного мозга ангиогенином также сопровождается увеличением теломерной ДНК в клетках колоний. Сопоставление типа колоний с интенсивностью ги6ридизации (т. е. количества теломерной ДНК в о6разце) предполагало, что увеличение количества детектируемой теломерной ДНК при о6ра6отке ангиогенином и hDNAgr имеет принципиально разное происхождение. Bестерн-6лот анализом и методом ПЦР в реальном времени установлено, что увеличение количества теломерной ДНК при о6ра6отке клеток костного мозга препаратом двуцепочечной ДНК не коррелирует с активностью эндогенной/экзогенной теломеразы. Для ангиогенина показано, что увеличение количества теломерной ДНК может 6ыть результатом активации эндогенной теломеразной активности. Разра6отан принцип амплификации нового генетического признака, пришедшего в гемопоэтические стволовые клетки с экстраклеточным двуцепочечным ДНК материалом и закрепившимся в реципиентном геноме или транзитно присутствующим в клетке в качестве новой генетической информации.</p></abstract><trans-abstract xml:lang="en"><p>The induced “recombinogenic situation” in hematopoietic stem cells and the activation of the cell’s reparative systems create the basis for recombination events between fragments of extracellular double-stranded DNA delivered into the cell and chromosomal DNA or other forms of the reparative-recombination process. In mouse and rat model organisms as well as in human bone marrow cells, changes in the amount of telomeric DNA in hematopoietic stem cells were assessed as an indicator of repair and recombination events that have occurred. In all experiments performed, recombinant human angiogenin was used as a comparison factor. Dot blot hybridization showed that in the colony cells obtained from the bone marrow cells of the model organisms as well as from human bone marrow cells treated with a double-stranded DNA preparation, there was a significant increase in the amount of telomeric DNA. Amplification of telomeric DNA in colony cells is not associated with contamination of the original DNA preparation with which the bone marrow cells were treated. Treatment of bone marrow cells with DNA that does not carry telomeric sequences (AluI PCR fragment) does not lead to an increase in the amount of telomeric DNA in the cells of grown colonies. This suggests the participation in the amplification of telomeric DNA of an extrachromosomal DNA template carrying telomeric DNA. It has been established that treatment of bone marrow cells with angiogenin also leads to an increase in telomeric DNA in colony cells. A comparison of the type of colonies with the intensity of hybridization (i. e. the amount of telomeric DNA in the sample) suggests that the increase in the amount of detectable telomeric DNA following treatment with angiogenin and hDNAgr has a fundamentally different origin. Western blot analysis and real-time PCR revealed that the increase in the amount of telomeric DNA following treatment of bone marrow cells with a double-stranded DNA preparation does not correlate with the activity of endogenous/exogenous telomerase. For angiogenin, it has been shown that an increase in the amount of telomeric DNA may be the result of activation of endogenous telomerase activity. A principle has been developed for the amplification of a new genetic trait that came into hematopoietic stem cells with extracellular double-stranded DNA material and was fixed in the recipient genome or was transitively present in the cell as new genetic information.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>гемопоэтические стволовые клетки</kwd><kwd>дот-6лот ги6ридизация</kwd><kwd>теломерная ДНК</kwd><kwd>ангиогенин</kwd><kwd>реком6иногенная ситуация</kwd></kwd-group><kwd-group xml:lang="en"><kwd>hematopoietic stem cells</kwd><kwd>dot blot hybridization</kwd><kwd>telomeric DNA</kwd><kwd>angiogenin</kwd><kwd>recombinogenic situation</kwd></kwd-group><funding-group xml:lang="en"><funding-statement>This work was done with the support of the Ministry of Science and Higher Education of the Russian Federation for the Institute of Cytology and Genetics SB RAS (state budget-funded project No. FWNR-2022-0016) and by A.A. Purtov, I.N. 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