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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">vavilov</journal-id><journal-title-group><journal-title xml:lang="ru">Вавиловский журнал генетики и селекции</journal-title><trans-title-group xml:lang="en"><trans-title>Vavilov Journal of Genetics and Breeding</trans-title></trans-title-group></journal-title-group><issn pub-type="epub">2500-3259</issn><publisher><publisher-name>Institute of Cytology and Genetics of Siberian Branch of the RAS</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.18699/VJ16.181</article-id><article-id custom-type="elpub" pub-id-type="custom">vavilov-805</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ГЕНОМИКА И ТРАНСКРИПТОМИКА</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>PLANT GENETICS AND BREEDING</subject></subj-group></article-categories><title-group><article-title>Генетическое разнообразие сортов картофеля российской селекции и стран ближнего зарубежья по данным полиморфизма SSR-локусов и маркеров R-генов устойчивости</article-title><trans-title-group xml:lang="en"><trans-title>Genetic diversity of potato varieties bred in Russia and near-abroad countries based on polymorphism of SSR-loci and markers associated with resistance R-genes</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Антонова</surname><given-names>О. Ю.</given-names></name><name name-style="western" xml:lang="en"><surname>Antonova</surname><given-names>O. Y.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург, Россия</p></bio><bio xml:lang="en"><p>Saint- Petersburg, Russia</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Швачко</surname><given-names>Н. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Shvachko</surname><given-names>N. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург, Россия</p></bio><bio xml:lang="en"><p>Saint- Petersburg, Russia</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Новикова</surname><given-names>Л. Ю.</given-names></name><name name-style="western" xml:lang="en"><surname>Novikova</surname><given-names>L. Y.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург, Россия</p></bio><bio xml:lang="en"><p>Saint- Petersburg, Russia</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Шувалов</surname><given-names>О. Ю.</given-names></name><name name-style="western" xml:lang="en"><surname>Shuvalov</surname><given-names>O. Y.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург, Россия</p></bio><bio xml:lang="en"><p>Saint- Petersburg, Russia</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Костина</surname><given-names>Л. И.</given-names></name><name name-style="western" xml:lang="en"><surname>Kostina</surname><given-names>L. I.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург, Россия</p></bio><bio xml:lang="en"><p>Saint- Petersburg, Russia</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Клименко</surname><given-names>Н. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Klimenko</surname><given-names>N. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург, Россия</p></bio><bio xml:lang="en"><p>Saint- Petersburg, Russia</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Шувалова</surname><given-names>А. Р.</given-names></name><name name-style="western" xml:lang="en"><surname>Shuvalova</surname><given-names>A. R.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург, Россия</p></bio><bio xml:lang="en"><p>Saint- Petersburg, Russia</p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Гавриленко</surname><given-names>Т. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Gavrilenko</surname><given-names>T. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Санкт-Петербург, Россия</p></bio><bio xml:lang="en"><p>Saint- Petersburg, Russia</p></bio><email xlink:type="simple">tatjana9972@yandex.ru</email><xref ref-type="aff" rid="aff-3"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru">Федеральное государственное бюджетное научное учреждение «Федеральный исследовательский центр Всероссийский институт генетических ресурсов растений им. Н.И. Вавилова (ВИР)»<country>Россия</country></aff><aff xml:lang="en">N.I. Vavilov Institute of Plant Genetic Resources (VIR)<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru">Федеральное государственное бюджетное научное учреждение «Федеральный исследовательский центр Всероссийский институт&#13;
генетических ресурсов растений им. Н.И. Вавилова (ВИР)»<country>Россия</country></aff><aff xml:lang="en">N.I. Vavilov Institute of Plant Genetic Resources (VIR)<country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru">Федеральное государственное бюджетное научное учреждение «Федеральный исследовательский центр Всероссийский институт генетических ресурсов растений им. Н.И. Вавилова (ВИР)»&#13;
&#13;
Федеральное государственное бюджетное образовательное учреждение высшего профессионального образования «Санкт-Петербургский государственный университет»<country>Россия</country></aff><aff xml:lang="en">N.I. Vavilov Institute of Plant Genetic Resources (VIR)&#13;
&#13;
Saint-Petersburg State University<country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2016</year></pub-date><pub-date pub-type="epub"><day>29</day><month>12</month><year>2016</year></pub-date><volume>20</volume><issue>5</issue><fpage>596</fpage><lpage>606</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Антонова О.Ю., Швачко Н.А., Новикова Л.Ю., Шувалов О.Ю., Костина Л.И., Клименко Н.С., Шувалова А.Р., Гавриленко Т.А., 2016</copyright-statement><copyright-year>2016</copyright-year><copyright-holder xml:lang="ru">Антонова О.Ю., Швачко Н.А., Новикова Л.Ю., Шувалов О.Ю., Костина Л.И., Клименко Н.С., Шувалова А.Р., Гавриленко Т.А.</copyright-holder><copyright-holder xml:lang="en">Antonova O.Y., Shvachko N.A., Novikova L.Y., Shuvalov O.Y., Kostina L.I., Klimenko N.S., Shuvalova A.R., Gavrilenko T.A.</copyright-holder><license license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://vavilov.elpub.ru/jour/article/view/805">https://vavilov.elpub.ru/jour/article/view/805</self-uri><abstract><p>Изучено генетическое разнообразие российских сортов картофеля и сортов селекции стран ближнего зарубежья из коллекции ВИР, которые создавались в 1931–2015 гг. На основании результатов анализа полиморфизма 14 монолокусных ядерных микросателлитов (SSR) проведено генотипирование 113 селекционных сортов. Дополнительно изучено распространение у сортов восьми маркеров трех R-генов, вовлеченных в контроль устойчивости растений к двум карантинным объектам – золотистой картофельной нематоде Globodera rostochiensis и возбудителю рака картофеля Synchytrium endobioticum, которые локально встречаются в отдельных регионах Российской  Федерации. У всех изученных сортов, устойчивых к патотипу 1 S. endobioticum, выявлен диагностический компонент маркера Nl-25 гена Sen1, у восприимчивых сортов фрагмент Nl-251400 не обнаружен. Полученные результаты продемонстрировали различную эффективность маркеров генов Н1 и Gro1-4, детерминирующих устойчивость к патотипу Ro1 G. rostochiensis; наиболее перспективно использовать несколько маркеров для детекции нематодоустойчивых сортов. Результаты молекулярного скрининга с шестью маркерами генов Н1 и Gro1-4 позволили детектировать у сортов шесть гаплотипов. Пять гаплотипов включали сорта с различными сочетаниями изученных маркеров, большинство (87,9 %) из этих сортов были устойчивы или слабо поражаемы нематодой. Наиболее многочисленный гаплотип H1/0 включал 76 сортов, у которых не было выявлено ни одного маркера генов Н1 и Gro1-4; 96,1 % из них были восприимчивыми к G. rostochiensis. Обсуждается связь между родословными сортов, временем их создания, составом гаплотипов и устойчивостью селекционных сортов к золотистой картофельной нематоде и возбудителю рака картофеля.</p></abstract><trans-abstract xml:lang="en"><p>The genetic diversity of potato varieties from the VIR collection was analyzed based on microsatellite analysis. These varieties have been bred in Russia and near-abroad countries since the 1931. Application of 14 highly polymorphic nuclear microsatellites (SSR) enabled the complete discrimination of all 113 varieties. Additionally, we have studied these varieties for the distribution of 8 DNA markers associated with three R-genes involved in the control of resistance to two quarantine objects: the potato wart Synchytrium endobioticum and golden potato cyst nematode Globodera rostochiensis, which occur locally in some regions of the Russian Federation. All the analyzed varieties with resistance to S. endobioticum pathotype 1 revealed the diagnostic marker Nl-251400 of the Sen1 gene and a few susceptible cultivars lost this diagnostic fragment. The tested markers of the H1 and Gro1-4 genes, which confer resistance to G. rostochiensis pathotype Ro1 revealed different predictiveness. In the molecular screening of potato varieties, it is better to use several markers of these genes. Results of molecular screening using six markers of the H1 and Gro1-4 genes allowed us to detect 6 haplotypes in the tested subset. Five haplotypes include varieties with different combinations of the markers tested, the majority (87.9 %) of these varieties were highly resistant or moderately resistant to G. rostochiensis. The most numerous haplotype H1/0 included 76 varieties, which did not possess any marker; 96.1 % of these varieties were susceptible to G. rostochiensis. Predictive associations between haplotype content, wart and nematode resistance, pedigree and ‘variety age’ are discussed.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>Solanum</kwd><kwd>картофель</kwd><kwd>SSR-генотипирование</kwd><kwd>MAS</kwd><kwd>Globodera rostochiensis</kwd><kwd>Synchytrium endobioticum</kwd></kwd-group><kwd-group xml:lang="en"><kwd>Solanum</kwd><kwd>potato</kwd><kwd>SSR-genotyping</kwd><kwd>MAS</kwd><kwd>Globodera rostochiensis</kwd><kwd>Synchytrium endobioticum</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Asano K., Tamiya S. Breeding of pest and disease resistant potato cultivars in japan by using classical and molecular approaches. JARQ. 2016;50(1):1-6.</mixed-citation><mixed-citation xml:lang="en">Asano K., Tamiya S. Breeding of pest and disease resistant potato cultivars in japan by using classical and molecular approaches. 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