Preview

Vavilov Journal of Genetics and Breeding

Advanced search

ALKALOHALOPHILIC BACTERIA OF THE FAMILY BACILLACEAE IN THE LAKES OF THE BADAIN JARAN DESERT (CHINA)

https://doi.org/10.18699/VJ18.373

Abstract

The Badain Jaran desert is located in the western part of Inner Mongolia (China) in the Alashan Highland. The investigated soda-salt lakes combine high pH (more than 9) and mineralization (up to 400 g/dm3), where conditions for the development of an alkali-halophilic microbial community are created. The purpose of our work was to isolate and study pure alkali-halophilic microorganisms in the lakes of the Badain Jaran desert. From the accumulative cultures of the cortex salt and the microbial mats of the lakes of the Badain Jaran desert, pure cultures belonging to the family Bacillaceae (the phylum Firmicutes) were isolated and described. With the help of biochemical methods, the ecological and physiological properties of the isolated bacteria were determined. The isolated bacteria exhibit the properties of alkalophiles and obligate alkalophiles and develop at pH 7–10.5, the optima ranging from 9 to 10. With respect to the concentration of NaCl, the strains showed the properties of obligate halophiles and extreme halophiles. With respect to temperature, the isolated microorganisms are mesophiles growing at 10–50 °C, the optimal growth being at 30–40 °C. With respect to the substrates used, the isolated cultures are noted for extensive metabolic activity and, when in their natural habitats, are supposedly active participants of the destruction of organic matter. To study the hydrochemical indicators of water, the following methods were used: atomic emission spectrometry with inductively coupled plasma, ion chromatography and capillary electrophoresis. As a result, it was found that a sodium cation and anions of carbonate, bicarbonate of chlorine and sulphate dominate in the soda-salt lakes of the Badain Jaran desert in a multicomponent composition. The results obtained broaden the notion of the diversity and ecological significance of bacteria in the extreme natural ecosystems of the Badain Jaran desert. The isolated strains are of interest for biotechnology as producers of enzymes resistant to high pH and mineralization.

About the Authors

E. B. Erdyneeva
Institute of General and Experimental Biology SB RAS
Russian Federation

Ulan-Ude



A. A. Radnagurueva
Institute of General and Experimental Biology SB RAS
Russian Federation

Ulan-Ude



N. L. Belkova
Limnological Institute SB RAS
Russian Federation

Irkutsk



Z. B. Namsaraev
National Research Center “Kurchatov Institute”
Russian Federation

Moscow



E. V. Lavrentieva
Institute of General and Experimental Biology SB RAS; Buryat State University
Russian Federation

Ulan-Ude



References

1. Annamalai N., Thavasi R., Vijayalakshmi S., Balasubramanian T. Extraction, purification and characterization of thermostable, alkaline tolerant α-amylase from Bacillus cereus. Indian J. Microbiol. 2011; 51(4):424-429. DOI 10.1007/s12088-011-0160-z.

2. Aruna K., Jill S., Radhika B. Production and partial characterization of alkaline protease from Bacillus tequilensis strains CSGAB0139 isolated from spoilt cottage cheese. Int. J. Appl. Biol. Pharm. Technol. 2014;5(3):201-221.

3. Boltyanskaya Yu.V. Haloalkaliphilic denitrifying bacteria of the genus Halomonas from soda lakes. Trudy Instituta mikrobiologii im. S.N. Vinogradskogo. Vyp. 14. Alkalofil’nye mikrobnye soobshchestva [Proceedings of the Vinogradskiy Institute of Microbiology. Issue 14: Alkaliphilic microbial communities]. Moscow: Nauka Publ., 2007;276-298. (in Russian)

4. Boutaiba S., Hacene H., Bidle K.A., Maupin-Furlow J.A. Microbial diversity of the hypersaline Sidi Ameur and Himalatt Salt Lakes of the Algerian Sahara. J. Arid Environ. 2011;75(10):909-916. DOI 10.1016/j.jaridenv.2011.04.010.

5. Bryanskaya A.V., Malup T.K., Lazareva E.V., Taran O.P., Rozanov A.S., Efimov V.M., Peltek S.E. The role of environmental factors for the composition of microbial communities of saline lakes in the Novosibirsk region. BMC Microbiol. 2016;16(S1):4-17. DOI 10.1186/s12866-015-0618-y.

6. Cao S.-J., Qu J.-H., Yuan H.-L., Li B.-Z. Salsuginibacillus halophilus sp. nov., a halophilic bacterium isolated from a soda lake. Int. J. Syst. Evol. Microbiol. 2010;60(6):1339-1343. DOI 10.1099/ijs.0.010181-0.

7. Casamayor E.O. Microbial biodiversity in saline shallow lakes of the Monegros Desert, Spain. FEMS Microbiol. Ecol. 2013;85(3):503518. DOI 10.1111/1574-6941.12139.

8. Chinnathambi A. Industrial important enzymes from alkaliphiles – an overview. Biosci. Biotechnol. Res. Asia. 2015;12(3):2007-2016. DOI 10.13005/bbra/1868.

9. Dong Z., Qian G., Lu P., Hu G. Investigation of the sand sea with the tallest dunes on Earth: China’s Badain Jaran Sand Sea. Earth-Science Rev. 2013;120(322):20-39. DOI 10.1016/j.earscirev.2013.02.003.

10. Fadrosh D.W., Ma B., Gajer P., Sengamalay N., Ott S., Brotman R.M., Ravel J. An improved dual-indexing approach for multiplexed 16S

11. rRNA gene sequencing on the Illumina MiSeq platform. Microbiome. 2014;2(6):2-7. DOI 10.1186/2049-2618-2-6.

12. Glaring M.A., Vester J.K., Lylloff J.E., Al-Soud W.A., Soorensen S.J., Stougaard P. Microbial diversity in a permanently cold and alkaline environment in Greenland. PLoS One. 2015;10(4):1-22. DOI 10.1371/journal.pone.0124863.

13. Gupta R., Beg Q., Lorenz P. Bacterial alkaline proteases: Molecular approaches and industrial applications. Appl. Microbiol. Biotechnol. 2002;59(1):15-32. DOI 10.1007/s00253-002-0975-y.

14. Hofmann J. The lakes in the SE part of the Badain Jaran Shamo, their limnology and geochemistry. Geowissenschaften. 1996;7(14):275278. DOI 10.2312/geowissenschaften.1996.14.275.

15. Jiang F., Cao S.J., Li Z.H., Fan H., Li H.F., Liu W.J., Yuan H.L. Salisediminibacterium halotolerans gen. nov., sp. nov., a halophilic bacterium from soda lake sediment. Int. J. Syst. Evol. Microbiol. 2012;62(9):2127-2132. DOI 10.1099/ijs.0.034488-0.

16. Jones B.E., Grant W.D., Collins N.C., Mwatha W.E. Alkaliphiles: diversity and identification. In: F.G. Priest, A. Ramos-Cormenzana, B.J. Tindall (Eds.). Bacterial Diversity and Systematics. Federation of Eur. Microbiol. Soc. Symp. Ser. Springer, Boston, MA, 1994;75:195-230. DOI 10.1007/978-1-4615-1869-3_12.

17. Kumar R.M., Kaur G., Kumar A., Bala M., Singh N.K., Kaur N., Mayil raj S. Taxonomic description and genome sequence of Bacillus campisalis sp. nov., a member of the genus Bacillus isolated from a solar saltern. Int. J. Syst. Evol. Microbiol. 2015;65(10):3235-3240. DOI 10.1099/ijsem.0.000400.

18. Lakshmi B.K.M., Sri P.V.R., Devi K.A., Hemalatha K.P.J. Media optimization of protease production by Bacillus licheniformis and partial characterization of Alkaline protease. Int. J. Curr. Microbiol. Appl. Sci. 2014;3(5):650-659.

19. Li L., Hao C., Wang L., Pei L. Microbial diversity of salt lakes in Badain Jaran desert. Acta Microbiol. Sin. 2015;55(4):412-424. PMID 26211315.

20. Mandic-Mulec I., Stefanic P., Van Elsas J.D. Ecology of Bacillaceae. Microbiol. Spectrum. 2015;3(2):1-24. DOI 10.1128/microbiolspec.TBS-0017-2013.

21. Marteinsson V.T., Bjornsdottir S.H., Bienvenu N., Kristjansson J.K., Birrien J.L. Rhodothermus profundi sp. nov., a thermophilic bacterium isolated from a deep-sea hydrothermal vent in the Pacific Ocean. Int. J. Syst. Evol. Microbiol. 2010;60(12):2729-2734. DOI 10.1099/ijs.0.012724-0.

22. Mwirichia R., Cousin S., Muigai A.W., Boga H.I., Stackebrandt E. Bacterial diversity in the haloalkaline lake Elmenteita, Kenya. Curr. Microbiol. 2011;62(1):209-221. DOI 10.1007/s00284-010-9692-4.

23. Netrusov A.I. Praktikum po mikrobiologii [Practical guide on microbiology]. Moscow, 2005. (in Russian)

24. Park S., Song J., Yoshizawa S., Choi A., Cho J.C., Kogure K. Rubrivirga marina gen. nov., sp. nov., a member of the family Rhodothermaceae isolated from deep seawater. Int. J. Syst. Evol. Microbiol. 2013;63(6):2229-2233. DOI 10.1099/ijs.0.046318-0.

25. Roy J.K., Rai S.K., Mukherjee A.K. Characterization and application of a detergent-stable alkaline α-amylase from Bacillus subtilis strain AS-S01a. Int. J. Biol. Macromol. 2012;50(1):219-229. DOI 10.1016/j.ijbiomac.2011.10.026.

26. Shine K., Kanimozhi K., Panneerselvam A., Muthukumar C., Thajuddin N. Production and optimization of alkaline protease by Bacillus cereus RS3 isolated from desert soil. Int. J. Adv. Res. Biol. Sci. 2016;3(7):193-202.

27. Sorokin D.Y., Gorlenko V.M., Namsaraev B.B., Namsaraev Z.B., Lysenko A.M., Eshinimaev B.T., Kuenen J.G. Prokaryotic communities of the north-eastern Mongolian soda lakes. Hydrobiologia. 2004;522(1-3):235-248. DOI 10.1023/B:HYDR.0000029989.73279.e4.

28. Sultanpuram V.R., Mothe T., Chintalapati S., Chintalapati V.R. Pelagirhabdus alkalitolerans gen. nov., sp. nov., an alkali-tolerant and thermotolerant bacterium isolated from beach sediment, and reclassification of Amphibacillus fermentum as Pelagirhabdus fermentum comb. nov. Int. J. Syst. Evol. Microbiol. 2016;66:84-90. DOI 10.1099/ijsem.0.000678.

29. Sultanpuram V.R., Mothe T., Mohammed F. Salisediminibacterium haloalkalitolerans sp. nov., isolated from Lonar soda lake, India, and a proposal for reclassification of Bacillus locisalis as Salisediminibacterium locisalis comb. nov., and the emended description of the genus Salisediminibacterium and of the species Salisediminibacterium halotolerans. Arch. Microbiol. 2015;197(4):553-560. DOI 10.1007/s00203-015-1081-8.

30. Switzer B.J., Burns B.A., Buzzelli J., Stolz J.F., Oremland R.S. Bacillus arsenicoselenatis sp. nov., and Bacillus selenitireducens sp. nov.: two haloalkaliphiles from Mono Lake, California that respire oxyanions of selenium and arsenic. Arch. Microbiol. 1998;171:19-30. DOI 10.1007/s002030050673.

31. Tamura K., Stecher G., Peterson D., Filipski A., Kumar S. MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol. Biol. Evol. 2013;30(12):2725-2729. DOI 10.1093/molbev/mst197.

32. Yang X., Ma N., Dong J., Zhu B., Bing X., Zhibang M., Jiaqi L. Recharge to the inter-dune lakes and Holocene climatic changes in the Badain Jaran Desert, western China. Quaternary Res. 2010;73(1): 10-19. DOI.org/10.1016/j.yqres.2009.10.009.

33. Zavarzin G.A. The formation of soda conditions as a global process. Trudy Instituta mikrobiologii im. S.N. Vinogradskogo. Vyp. 14. Alkalofil’nye mikrobnye soobshchestva [Proceedings of the Vinogradskiy Institute of Microbiology. Issue 14: Alkaliphilic microbial communities]. Moscow: Nauka Publ., 2007;8-57. (in Russian)

34. Zavarzin G.A., Zhilina T.N. Soda lakes are a natural model of the ancient biosphere of continents. Priroda = Nature (Moscow). 2000;2: 1-9. (in Russian)

35. Zavarzin G.A., Zhilina T.N., Kevbrin V.V. The alkaliphilic microbial community and its functional diversity. Mikrobiologiya = Microbiology. 1999;68(5):579-599. (in Russian)

36. Zhilina T.N., Garnova E.S., Turova T.P., Kostrikina N.A., Zavarzin G.A. Amphibacillus fermentum sp. nov. and Amphibacillus tropicus sp. nov., new alkaliphilic, facultatively anaerobic, saccharolytic Bacilli from Lake Magadi. Microbiology. 2001;70(6):711-722. DOI 10.1023/A:1013196017556.


Review

Views: 836


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 2500-3259 (Online)