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Vavilov Journal of Genetics and Breeding

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SYSTEMS COMPUTATIONAL BIOLOGY

 
Issue Title
 
Vol 29, No 7 (2025) Identification of proteins regulating phenotype-associated genes of M2 macrophages: a bioinformatic analysis Abstract   PDF (Eng)
E. A. Antropova, I. V. Yatsyk, P. S. Demenkov, T. V. Ivanisenko, V. A. Ivanisenko
 
Vol 29, No 7 (2025) In silico reconstruction of the gene network for cytokine regulation of ASD-associated Abstract   PDF (Eng)
N. M. Levanova, E. G. Vergunov, A. N. Savostyanov, I. V. Yatsyk, V. A. Ivanisenko
 
Vol 29, No 7 (2025) The gene network and knowledge base on human thermoregulation Abstract   PDF (Eng)
E. V. Ignatieva, P. S. Demenkov, A. G. Bogomolov, R. A. Ivanov, S. A. Lashin, A. D. Mikhailova, A. E. Alekseeva, N. S. Yudin
 
Vol 29, No 7 (2025) Searching for biological processes as targets for rheumatoid arthritis targeted therapy with AND-System, an integrated software and information platform Abstract   PDF (Eng)
E. L. Mishchenko, I. V. Yatsyk, P. S. Demenkov, A. V. Adamovskaya, T. V. Ivanisenko, M. A. Kleshchev, V. A. Ivanisenko
 
Vol 29, No 7 (2025) Mathematical models of iron metabolism: structure and functions Abstract   PDF (Eng)
N. I. Melchenko, I. R. Akberdin
 
Vol 29, No 7 (2025) Identification and analysis of the connection network structure between the components of the immune system in children Abstract   PDF (Eng)
D. S. Grebennikov, A. P. Toptygina, G. A. Bocharov
 
Vol 29, No 7 (2025) Self-learning virtual organisms in a physics simulator: on the optimal resolution of their visual system, the architecture of the nervous system and the computational complexity of the problem Abstract   PDF (Eng)
M. S. Zenin, A. P. Devyaterikov, A. Yu. Palyanov
 
Vol 29, No 7 (2025) Reconstruction and analysis of the gene network regulating apoptosis in hepatocellular carcinoma based on scRNA-seq data and the AND-System knowledge base Abstract   PDF (Eng)
A. V. Adamovskaya, I. V. Yatsyk, M. A. Kleshchev, P. S. Demenkov, T. V. Ivanisenko, V. A. Ivanisenko
 
Vol 29, No 7 (2025) Hedgehog signaling in humans: the HH_Signal_pathway_db knowledge base Abstract   PDF (Eng)
T. A. Bukharina, A. M. Bondarenko, D. P. Furman
 
Vol 27, No 7 (2023) The central regulatory circuit in the gene network controlling the morphogenesis of Drosophila mechanoreceptors: an in silico analysis Abstract   PDF (Eng)
T. A. Bukharina, V. P. Golubyatnikov, D. P. Furman
 
Vol 27, No 7 (2023) Bifurcation analysis of multistability and hysteresis in a model of HIV infection Abstract   PDF (Eng)
I. V. Mironov, M. Yu. Khristichenk, Yu. M. Nechepurenko, D. S. Grebennikov, G. A. Bocharov
 
Vol 27, No 7 (2023) Gene networks for use in metabolomic data analysis of blood plasma from patients with postoperative delirium Abstract   PDF (Eng)
V. A. Ivanisenko, N. V. Basov, A. A. Makarova, A. S. Venzel, A. D. Rogachev, P. S. Demenkov, T.  V. Ivanisenko, M. A. Kleshchev, E. V. Gaisler, G. B. Moroz, V. V. Plesko, Y. S. Sotnikova, Y. V. Patrushev, V. V. Lomivorotov, N. A. Kolchanov, A. G. Pokrovsky
 
Vol 27, No 7 (2023) Molecular-genetic pathways of hepatitis C virus regulation of the expression of cellular factors PREB and PLA2G4C, which play an important role in virus replication Abstract   PDF (Eng)
E. L. Mishchenko, A. A. Makarova, E. A. Antropova, A. S. Venzel, T. V. Ivanisenko, P. S. Demenkov, V. A. Ivanisenko
 
Vol 27, No 7 (2023) Prioritization of potential pharmacological targets for the development of anti-hepatocarcinoma drugs modulating the extrinsic apoptosis pathway: the reconstruction and analysis of associative gene networks help Abstract   PDF (Eng)
P. S. Demenkov, E. A. Antropova, A. V. Adamovskaya, E. I. Mishchenko, T. M. Khlebodarova, T. V. Ivanisenko, N. V. Ivanisenko, A. S. Venzel, I. N. Lavrik, V. A. Ivanisenko
 
Vol 27, No 7 (2023) RatDEGdb: a knowledge base of differentially expressed genes in the rat as a model object in biomedical research Abstract   PDF (Eng)
I. V. Chadaeva, S. V. Filonov, K. A. Zolotareva, B. M. Khandaev, N. I. Ershov, N. L. Podkolodnyy, R. V. Kozhemyakina, D. A. Rasskazov, A. G. Bogomolov, E. Yu. Kondratyuk, N. V. Klimova, S. G. Shikhevich, M. A.  Ryazanova, L. A. Fedoseeva, О. Е. Redina, О. S. Kozhevnikova, N. A. Stefanova, N. G. Kolosova, A. L. Markel, M. P. Ponomarenko, Yu. D. Oshchepkov
 
Vol 26, No 8 (2022) Development of a neural network for diagnosing the risk of depression according to the experimental data of the stop signal paradigm Abstract   PDF (Eng)
M. O. Zelenskih, A. E. Saprygin, S. S. Tamozhnikov, P. D. Rudych, D. A. Lebedkin, A.  N. Savostyanov
 
Vol 26, No 8 (2022) Molecular mechanisms of vascular tissue patterning in Arabidopsis thaliana L. roots Abstract   PDF (Eng)
A. D. Sidorenko, N. A. Omelyanchuk, E. V. Zemlyanskaya
 
Vol 26, No 8 (2022) Computer analysis of regulation of hepatocarcinoma marker genes hypermethylated by HCV proteins Abstract   PDF (Eng)
E. A. Antropova, T. M. Khlebodarova, P. S. Demenkov, A. S. Venzel, N. V. Ivanisenko, A.  D.  Gavrilenko, T.  V. Ivanisenko, A. V. Adamovskaya, P. M. Revva, I. N. Lavrik, V. A. Ivanisenko
 
Vol 26, No 8 (2022) Rational metabolic engineering of Corynebacterium glutamicum to create a producer of L-valine Abstract   PDF (Eng)
M. E. Sheremetieva, K. E. Anufriev, T. M. Khlebodarova, N. A. Kolchanov, A. S. Yanenko
 
Vol 26, No 8 (2022) Stratifications and foliations in phase portraits of gene network models Abstract   PDF (Eng)
V. P. Golubyatnikov, A. A. Akinshin, N. B. Ayupova, L. S. Minushkina
 
Vol 26, No 8 (2022) Validation of a face image assessment technology to study the dynamics of human functional states in the EEG resting-state paradigm Abstract   PDF (Eng)
A. N. Savostyanov, E. G. Vergunov, A. E. Saprygin, D. A. Lebedkin
 
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